BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZD03RM1.SCF screened BAC_end
         (958 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1709                                                        1663   0.0  

>3x_Contig1709 
          Length = 16948

 Score = 1663 bits (839), Expect = 0.0
 Identities = 901/915 (98%), Gaps = 6/915 (0%)
 Strand = Plus / Minus

                                                                         
Query: 44    gctttggaactggtcgattctcaaagatcagatttgtgttcggtaattaatgagtttagt 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16322 gctttggaactggtcgattctcaaagatcagatttgtgttcggtaattaatgagtttagt 16263

                                                                         
Query: 104   gaaactttgaaagcactggctgatttggaattatcgaatcgaacatcagatctacttcaa 163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16262 gaaactttgaaagcactggctgatttggaattatcgaatcgaacatcagatctacttcaa 16203

                                                                         
Query: 164   aactttgcggaagtccaccttcgtataaaagagtctacttccaggagctcaatgcatgat 223
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 16202 aactttgcggaagtccaccttcgtataaaagagtctacttccaggagctcaatgcaggat 16143

                                                                         
Query: 224   tcgctaacacttggcataactatcgatgataatctcagggcaataggtagtgtgaaagcc 283
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16142 tcgctaacacttggcataactatcgatgataatctcagggcaataggtagtgtgaaagcc 16083

                                                                         
Query: 284   gtgctaaatcaaaggaaaaaactcggttactatattctgcttgttgaaaacgacctgaat 343
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16082 gtgctaaatcaaaggaaaaaactcggttactatattctgcttgttgaaaacgacctgaat 16023

                                                                         
Query: 344   aagaagcaaacccaattcaacaaagtgtcaggaaactctgccaatagtgaaaaggccacc 403
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16022 aagaagcaaacccaattcaacaaagtgtcaggaaactctgccaatagtgaaaaggccacc 15963

                                                                         
Query: 404   tcaattgaaaacgaacttcgcatcctcacatcccgatgcaataaaataaaacaggaatgg 463
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15962 tcaattgaaaacgaacttcgcatcctcacatcccgatgcaataaaataaaacaggaatgg 15903

                                                                         
Query: 464   cagacaatcgctgaagttataagaaaagatgttaaccaacatgacgtcgatacaattgaa 523
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15902 cagacaatcgctgaagttataagaaaagatgttaaccaacatgacgtcgatacaattgaa 15843

                                                                         
Query: 524   gattttaggaataacatggaaatataccttgagtcagccattgaaagtcaaaaagagtgc 583
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15842 gattttaggaataacatggaaatataccttgagtcagccattgaaagtcaaaaagagtgc 15783

                                                                         
Query: 584   attgaaatttgggaaacgttctaccagaataatctataaattatgaataatggtttactg 643
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15782 attgaaatttgggaaacgttctaccagaataatctataaattatgaataatggtttactg 15723

                                                                         
Query: 644   tcatttgtattatatatttcctaaacccttaacgtcttcttttttggcatcattttcttc 703
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15722 tcatttgtattatatatttcctaaacccttaacgtcttcttttttggcatcattttcttc 15663

                                                                         
Query: 704   ttcgacaaagatgctgccaagtagatctattttgtcttgttgtttacctagctcgttgaa 763
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15662 ttcgacaaagatgctgccaagtagatctattttgtcttgttgtttacctagctcgttgaa 15603

                                                                         
Query: 764   tgaaacgatcatcccatcanaggcaaaacataattctctggcgttcaacttgatactacg 823
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 15602 tgaaacgatcatcccatcaaaggcaaaacataattctctggcgttcaacttgatactac- 15544

                                                                         
Query: 824   ggttggtattcgggaccttttgggtatctttgtgagaaatgcgttagncagagttttctt 883
             ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||
Sbjct: 15543 ggttggtattcgggacc-tttgggtatctttgtgagaaatgcgttagcaagagttttctt 15485

                                                                         
Query: 884   gcattcatcgnngttgaaac-tttatagcctcatt-atgggactatgtcttttttt-ata 940
             ||||||||||   ||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 15484 gcattcatcgtgtttgaaacttttatagcctcattaatggtactatgtctttttttcata 15425

                            
Query: 941   gcttc-acttttaat 954
             ||||| |||||||||
Sbjct: 15424 gcttcaacttttaat 15410


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7798
Number of Sequences: 1807
Number of extensions: 7798
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)