BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZD05FM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1771 1691 0.0 >3x_Contig1771 Length = 25932 Score = 1691 bits (853), Expect = 0.0 Identities = 873/879 (99%), Gaps = 1/879 (0%) Strand = Plus / Plus Query: 86 tagcgtcgtatttacaacagaaaacatggcctgtagcgatagcgcaaactacaattggct 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14519 tagcgtcgtatttacaacagaaaacatggcctgtagcgatagcgcaaactacaattggct 14578 Query: 146 gctcaggatggcatgcaacgtgaattaacggctcatcgaatacaaactccaatattggag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14579 gctcaggatggcatgcaacgtgaattaacggctcatcgaatacaaactccaatattggag 14638 Query: 206 aacttttggaggccaacacctccaaagaagcagcgcgcttctttgccttcgtatttttac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14639 aacttttggaggccaacacctccaaagaagcagcgcgcttctttgccttcgtatttttac 14698 Query: 266 ccatttaatatgactcacctagtgatatactgtattgagcaatagtaatcactaggtttt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14699 ccatttaatatgactcacctagtgatatactgtattgagcaatagtaatcactaggtttt 14758 Query: 326 caggctaaagaaatgatataattcgttccactccaacagtaagtcgctctcatcgctcaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14759 caggctaaagaaatgatataattcgttccactccaacagtaagtcgctctcatcgctcaa 14818 Query: 386 gtaaactctgttgtaattttttttgattttctttctattggatgaaaataaaaaccagaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14819 gtaaactctgttgtaattttttttgattttctttctattggatgaaaataaaaaccagaa 14878 Query: 446 atacatatttaaggtttgtcaacaatggaaggcgagatgggatctgtgcgttgaggagat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14879 atacatatttaaggtttgtcaacaatggaaggcgagatgggatctgtgcgttgaggagat 14938 Query: 506 gttctggcgataatagattccacatgcggttgtaattctggcaattcgtcgatgatcttt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14939 gttctggcgataatagattccacatgcggttgtaattctggcaattcgtcgatgatcttt 14998 Query: 566 tcagctaacgaatcgcggagcttgttgaggccgtgtatctttgcgcgttggtactggttg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14999 tcagctaacgaatcgcggagcttgttgaggccgtgtatctttgcgcgttggtactggttg 15058 Query: 626 gaccgacggatcgcctctacaaactctcttgtgtacacatcggggttccttccgtcttct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15059 gaccgacggatcgcctctacaaactctcttgtgtacacatcggggttccttccgtcttct 15118 Query: 686 atatactgtaaaacgtccaatggtactaggaaattctgtagttgtgactcgggatcgtta 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15119 atatactgtaaaacgtccaatggtactaggaaattctgtagttgtgactcgggatcgtta 15178 Query: 746 gcttgttgattcaattgtttcatacggtcaacattacgttgcatgttggtaaccatacct 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15179 gcttgttgattcaattgtttcatacggtcaacattacgttgcatgttggtaaccatacct 15238 Query: 806 tgcattgaatcttcagttccctggaaatcatanacataaacaccaagctcaatgaatgag 865 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 15239 tgcattgaatcttcagttcctgggaaatcataaacataaacaccaagctcaatgaatgag 15298 Query: 866 tcaattatcgcagctaggcgttgttctgtctc-accaaatcggtttgcaattnctctaag 924 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 15299 tcaattatcgcagctaggcgttgttctgtctcaaccaaatcggtttgcaatttctctaag 15358 Query: 925 ttttgctctaccatctcgtccgtatatttcgggattact 963 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 15359 ttttgctctaccatctcgtccgtatatctcgggattact 15397 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6134 Number of Sequences: 1807 Number of extensions: 6134 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)