BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZD06FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1343 1566 0.0 >3x_Contig1343 Length = 6877 Score = 1566 bits (790), Expect = 0.0 Identities = 834/844 (98%), Gaps = 4/844 (0%) Strand = Plus / Plus Query: 88 cttcgatctcagatccaatactgatttctcattattagtgtgaaaccggactttgtatta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5551 cttcgatctcagatccaatactgatttctcattattagtgtgaaaccggactttgtatta 5610 Query: 148 cgtaccctttccactgtcatatttccaacttctatttatgtcctgttctagttctaatta 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5611 cgtaccctttccactgtcatatttccaacttctatttatgtcctgttctagttctaatta 5670 Query: 208 cactagctccagtctaatggatccttcctccacttttttattttcctttcttacgtcttc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5671 cactagctccagtctaatggatccttcctccacttttttattttcctttcttacgtcttc 5730 Query: 268 ggatgtcttgaaatgcaatattttcgtattttaggttccttctattagtagaagctcttt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5731 ggatgtcttgaaatgcaatattttcgtattttaggttccttctattagtagaagctcttt 5790 Query: 328 aaggttttaaggttgctttcgattttaaggtcatgtgagaaaagcacgtaagataatgaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5791 aaggttttaaggttgctttcgattttaaggtcatgtgagaaaagcacgtaagataatgaa 5850 Query: 388 cgcttgcttggcttggtttaattttgtttcggggcggagctcccctggatcgattggccc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5851 cgcttgcttggcttggtttaattttgtttcggggcggagctcccctggatcgattggccc 5910 Query: 448 aatctagtccgtccgttctcctactctcgtgtcctttttttttccggatcgtactgcgat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5911 aatctagtccgtccgttctcctactctcgtgtcctttttttttccggatcgtactgcgat 5970 Query: 508 ccagagattcctttcgtatttgaatttccagatttggccagatcgagacttaagtaatca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5971 ccagagattcctttcgtatttgaatttccagatttggccagatcgagacttaagtaatca 6030 Query: 568 tttgcttttaactctggtggtacttacagatctagcgatctcattcggttcattgtccca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6031 tttgcttttaactctggtggtacttacagatctagcgatctcattcggttcattgtccca 6090 Query: 628 taaccggtgaagcaagcatgtaatttagaatctcgagacacatgcggcagcaatacgtgg 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6091 taaccggtgaagcaagcatgtaatttagaatctcgagacacatgcggcagcaatacgtgg 6150 Query: 688 agaagaggctaaaccgcttggtatcattntttttttttttaattttggcatttcgtgctt 747 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 6151 agaagaggctaaaccgcttggtatcattttttttttttttaattttggcatttcgtgctt 6210 Query: 748 gaataatgtctgagcttctttaggttcagcagtttgggaatacattctaaacaagaattt 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6211 gaataatgtctgagcttctttaggttcagcagtttgggaatacattctaaacaagaattt 6270 Query: 808 gaagaaa-tacctttgttttgaacagaggctggtctatatttagctttttatta-tcttc 865 ||||||| ||||||||||| ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 6271 gaagaaattacctttgtttgaaacagaggctgttctatatttagc-ttttattattcttc 6329 Query: 866 tagctatttntgggtttttttggctagttggcgatgcttcgaac-tgtgttggtgagaga 924 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 6330 tagctatttttgtgtttttttggctagttggcgatgcttcgaacgtgtgttggtgagaga 6389 Query: 925 atct 928 |||| Sbjct: 6390 atct 6393 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,679 Number of Sequences: 1807 Number of extensions: 11679 Number of successful extensions: 86 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)