BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZD09FM1.SCF screened BAC_end
         (959 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1318                                                        1620   0.0  

>3x_Contig1318 
          Length = 8566

 Score = 1620 bits (817), Expect = 0.0
 Identities = 863/872 (98%), Gaps = 5/872 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   cacgaatgtaactcattacaattatcacaaggtaaactaactggattaatttatgtgaat 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6363 cacgaatgtaactcattacaattatcacaaggtaaactaactggattaatttatgtgaat 6422

                                                                        
Query: 147  aatttgagttttgaaaagttcattgaaatcaagttctccttcaatggatggaaagatatt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6423 aatttgagttttgaaaagttcattgaaatcaagttctccttcaatggatggaaagatatt 6482

                                                                        
Query: 207  cactatgttactgccaattttaagcgtacaatcactgacaccgttgacgaatttcaattt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6483 cactatgttactgccaattttaagcgtacaatcactgacaccgttgacgaatttcaattt 6542

                                                                        
Query: 267  ctaatcaatttatcatcttttgtttattttctaaaggtgaagaacttgattttgtttaac 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6543 ctaatcaatttatcatcttttgtttattttctaaaggtgaagaacttgattttgtttaac 6602

                                                                        
Query: 327  tcgttgatttctcctttaaccattcaactttgttgtaggtacgatgttaacggagaaaca 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6603 tcgttgatttctcctttaaccattcaactttgttgtaggtacgatgttaacggagaaaca 6662

                                                                        
Query: 387  tattacgataacaacaattacgaaaactatcaagtgtcattagacgctataaccaatttg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6663 tattacgataacaacaattacgaaaactatcaagtgtcattagacgctataaccaatttg 6722

                                                                        
Query: 447  aagcaaaaatcaaagaagaaatcaaatcgccaccggctgctgaagtcatcatccattatg 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6723 aagcaaaaatcaaagaagaaatcaaatcgccaccggctgctgaagtcatcatccattatg 6782

                                                                        
Query: 507  aagagatctttgagttcagataactttacgactgacggtaattataaatttgcttctcta 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6783 aagagatctttgagttcagataactttacgactgacggtaattataaatttgcttctcta 6842

                                                                        
Query: 567  tctccggtaccatcatcagtagatcatacgaaattagttccaccgaagttgggtagaaga 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6843 tctccggtaccatcatcagtagatcatacgaaattagttccaccgaagttgggtagaaga 6902

                                                                        
Query: 627  ttctctgaagacactgattttttcaactcttcaccattgaagaacgtttctccaaattat 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6903 ttctctgaagacactgattttttcaactcttcaccattgaagaacgtttctccaaattat 6962

                                                                        
Query: 687  actacgactccgttgaatcaaaaagatccaaagtacgacgagttaatcaaatcctactgt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6963 actacgactccgttgaatcaaaaagatccaaagtacgacgagttaatcaaatcctactgt 7022

                                                                        
Query: 747  ttctatgatccgaactccgctgctgcatcatcgagtgataaatctaatagatcgatgacc 806
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 7023 ttctatgatccgaactccgctgctgcatcatcgagtgataaatctaatagatcgatga-c 7081

                                                                        
Query: 807  aactg-aacagtttccaacttcagatactaattcgactactaattccactggtagtccag 865
            ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7082 aactgaaacag-ttccaacttcagatactaattcgactactaattccactggtagtccag 7140

                                                                        
Query: 866  cttttcttaactcaaa-ttaccatctgaggattgcattccttcgaagagagattcacc-a 923
            ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 7141 cttttctaaactcaaatttaccatctgagaattgcattccttcgaagagagattcaccaa 7200

                                            
Query: 924  agcttgacactatgaaaagntcgaaatgctga 955
            |||| |||||||||||||| ||||||||||||
Sbjct: 7201 agctagacactatgaaaagttcgaaatgctga 7232


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8530
Number of Sequences: 1807
Number of extensions: 8530
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)