BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZD09FM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1318 1620 0.0 >3x_Contig1318 Length = 8566 Score = 1620 bits (817), Expect = 0.0 Identities = 863/872 (98%), Gaps = 5/872 (0%) Strand = Plus / Plus Query: 87 cacgaatgtaactcattacaattatcacaaggtaaactaactggattaatttatgtgaat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6363 cacgaatgtaactcattacaattatcacaaggtaaactaactggattaatttatgtgaat 6422 Query: 147 aatttgagttttgaaaagttcattgaaatcaagttctccttcaatggatggaaagatatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6423 aatttgagttttgaaaagttcattgaaatcaagttctccttcaatggatggaaagatatt 6482 Query: 207 cactatgttactgccaattttaagcgtacaatcactgacaccgttgacgaatttcaattt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6483 cactatgttactgccaattttaagcgtacaatcactgacaccgttgacgaatttcaattt 6542 Query: 267 ctaatcaatttatcatcttttgtttattttctaaaggtgaagaacttgattttgtttaac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6543 ctaatcaatttatcatcttttgtttattttctaaaggtgaagaacttgattttgtttaac 6602 Query: 327 tcgttgatttctcctttaaccattcaactttgttgtaggtacgatgttaacggagaaaca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6603 tcgttgatttctcctttaaccattcaactttgttgtaggtacgatgttaacggagaaaca 6662 Query: 387 tattacgataacaacaattacgaaaactatcaagtgtcattagacgctataaccaatttg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6663 tattacgataacaacaattacgaaaactatcaagtgtcattagacgctataaccaatttg 6722 Query: 447 aagcaaaaatcaaagaagaaatcaaatcgccaccggctgctgaagtcatcatccattatg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6723 aagcaaaaatcaaagaagaaatcaaatcgccaccggctgctgaagtcatcatccattatg 6782 Query: 507 aagagatctttgagttcagataactttacgactgacggtaattataaatttgcttctcta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6783 aagagatctttgagttcagataactttacgactgacggtaattataaatttgcttctcta 6842 Query: 567 tctccggtaccatcatcagtagatcatacgaaattagttccaccgaagttgggtagaaga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6843 tctccggtaccatcatcagtagatcatacgaaattagttccaccgaagttgggtagaaga 6902 Query: 627 ttctctgaagacactgattttttcaactcttcaccattgaagaacgtttctccaaattat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6903 ttctctgaagacactgattttttcaactcttcaccattgaagaacgtttctccaaattat 6962 Query: 687 actacgactccgttgaatcaaaaagatccaaagtacgacgagttaatcaaatcctactgt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6963 actacgactccgttgaatcaaaaagatccaaagtacgacgagttaatcaaatcctactgt 7022 Query: 747 ttctatgatccgaactccgctgctgcatcatcgagtgataaatctaatagatcgatgacc 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7023 ttctatgatccgaactccgctgctgcatcatcgagtgataaatctaatagatcgatga-c 7081 Query: 807 aactg-aacagtttccaacttcagatactaattcgactactaattccactggtagtccag 865 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7082 aactgaaacag-ttccaacttcagatactaattcgactactaattccactggtagtccag 7140 Query: 866 cttttcttaactcaaa-ttaccatctgaggattgcattccttcgaagagagattcacc-a 923 ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 7141 cttttctaaactcaaatttaccatctgagaattgcattccttcgaagagagattcaccaa 7200 Query: 924 agcttgacactatgaaaagntcgaaatgctga 955 |||| |||||||||||||| |||||||||||| Sbjct: 7201 agctagacactatgaaaagttcgaaatgctga 7232 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8530 Number of Sequences: 1807 Number of extensions: 8530 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)