BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZD09RM1.SCF screened BAC_end
         (949 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1762                                                        1596   0.0  

>3x_Contig1762 
          Length = 22098

 Score = 1596 bits (805), Expect = 0.0
 Identities = 891/911 (97%), Gaps = 7/911 (0%)
 Strand = Plus / Minus

                                                                         
Query: 43    gctttgactgaaac-tactgtctttgatacgagagttatcctccgatagtcgagtcagtg 101
             |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 18382 gctttgactgaaacatactgtctcggatacgagagttatcctccgatagtcgagtcagtg 18323

                                                                         
Query: 102   agtgcgtttgtggccccaatagtttaagagtaagtgtcaagatgtcccgtgaaggtttcc 161
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18322 agtgcgtttgtggccccaatagtttaagagtaagtgtcaagatgtcccgtgaaggtttcc 18263

                                                                         
Query: 162   aaatcccaacgaatttagatgctgctgctgctggtgcagctcagagcagaactgttcctt 221
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 18262 aaatcccaacgaatttagatgctgctgctgctggtgcagctcagagcagaactgccactt 18203

                                                                         
Query: 222   tgaaatacatctgcgcagagtgttcaagcagactttcgctttccagaactgatcccgtcc 281
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18202 tgaaatacatctgcgcagagtgttcaagcagactttcgctttccagaactgatcccgtcc 18143

                                                                         
Query: 282   gttgcaagaattgcggtcaccgtatcctactcaaggccagaaccaagagaatggtccagt 341
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18142 gttgcaagaattgcggtcaccgtatcctactcaaggccagaaccaagagaatggtccagt 18083

                                                                         
Query: 342   tcgaagccaggtaaacctgttcccattccatcacataaactatatgcatataaactatat 401
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18082 tcgaagccaggtaaacctgttcccattccatcacataaactatatgcatataaactatat 18023

                                                                         
Query: 402   atgtattacagcatctttcctgtatgtacattaataaacgttgacatttaaacgtttctc 461
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18022 atgtattacagcatctttcctgtatgtacattaataaacgttgacatttaaacgtttctc 17963

                                                                         
Query: 462   aattgaaacacgactacatgggcatcgctagtcgacagacggatgtccgaagtcagctgg 521
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17962 aattgaaacacgactacatgggcatcgctagtcgacagacggatgtccgaagtcagctgg 17903

                                                                         
Query: 522   ggttataccggctaatcacactgcgcaaaattcctttttctttatgtgatggaaaatctc 581
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17902 ggttataccggctaatcacactgcgcaaaattcctttttctttatgtgatggaaaatctc 17843

                                                                         
Query: 582   tgagaaaactttatgattttgggcagcttcaccatctaattttaaaatcaaagaataacg 641
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17842 tgagaaaactttatgattttgggcagcttcaccatctaattttaaaatcaaagaataacg 17783

                                                                         
Query: 642   tcaccgttagatttgcatatatccacttccaaactgaaaagacgaagtttgacggacgtt 701
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17782 tcaccgttagatttgcatatatccacttccaaactgaaaagacgaagtttgacggacgtt 17723

                                                                         
Query: 702   ttgtggaccatttgagctaaggcttgataggcaactgtttggtgtgattagtgaagagag 761
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17722 ttgtggaccatttgagctaaggcttgataggcaactgtttggtgtgattagtgaagagag 17663

                                                                         
Query: 762   agtgggtgcttttgacggtgccaatatctgcttttgcgtgtattatcttggttgntgatt 821
             ||||||||||||  |||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 17662 agtgggtgctttgaacggtgccaatatctgcttttgcgtgtattatcttgtttgttgatt 17603

                                                                         
Query: 822   ttggggttt-attgaacgtttctcttctc-aacacaacaaa-gatcagtgcttttttttg 878
             |||| |||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 17602 ttggtgtttaattgaacgtttctctcctcaaacacaacaaaggatcagtgcttttttttg 17543

                                                                         
Query: 879   atagaatttgaagtcttttgcgaggtc-aaaagctgtatcttaagttctttgtata-ccc 936
             |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |||
Sbjct: 17542 atagaa-ttgaagtcttttgcgaggtcaaaaagctgtatcttaggttctttgtatacccc 17484

                        
Query: 937   agntacatctt 947
             || ||||||||
Sbjct: 17483 agttacatctt 17473


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7053
Number of Sequences: 1807
Number of extensions: 7053
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)