BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZE02FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1769 1590 0.0 >3x_Contig1769 Length = 25795 Score = 1590 bits (802), Expect = 0.0 Identities = 856/870 (98%), Gaps = 3/870 (0%) Strand = Plus / Plus Query: 89 atattgcttttcatgctacattagccactaatgtgaaaagataacatcgaaactctttag 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13407 atattgcttttcatgctacattagccactaatgtgaaaagataacatcgaaactctttag 13466 Query: 149 attacctttaaatgcctctcttcgtggaagtcggtccaatatcaccaagaccacgacgaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13467 attacctttaaatgcctctcttcgtggaagtcggtccaatatcaccaagaccacgacgaa 13526 Query: 209 tagaggcgcaggagacattcttccatctgtcaaaagaagtgaatatgctgcagccagaca 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13527 tagaggcgcaggagacattcttccatctgtcaaaagaagtgaatatgctgcagccagaca 13586 Query: 269 accaataacacagcattacataagagaagaggtactttttctatcaccgactggaattta 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13587 accaataacacagcattacataagagaagaggtactttttctatcaccgactggaattta 13646 Query: 329 aaagccgtccggaaaatcccattcttagattggacaatctgatgtttaactcttgctttt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13647 aaagccgtccggaaaatcccattcttagattggacaatctgatgtttaactcttgctttt 13706 Query: 389 tttctctcccttagcagctcttgctaggaagcaattatcttgtgcaggcttaaagtttca 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13707 tttctctcccttagcagctcttgctaggaagcaattatcttgtgcaggcttaaagtttca 13766 Query: 449 tggagaaccctattgacctggacctgtgcattgtatttctaatcgctacgcgttctgtgc 508 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 13767 tggagaaccctattgacctggacctgtgcattgtatttctaaagtctacgcgttctgtgc 13826 Query: 509 agttatactgagacatcaaatatggctgtgaagaaggagttccaataaagttatttttgg 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13827 agttatactgagacatcaaatatggctgtgaagaaggagttccaataaagttatttttgg 13886 Query: 569 attagctaatgtcagggacaaaggaaatgaatgcagctctcccttgcaccagagaatggt 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13887 attagctaatgtcagggacaaaggaaatgaatgcagctctcccttgcaccagagaatggt 13946 Query: 629 ctatgggagtgcaatcttccgtcgtccattgacaccagctcggttcgtacagaaagataa 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13947 ctatgggagtgcaatcttccgtcgtccattgacaccagctcggttcgtacagaaagataa 14006 Query: 689 tatttacctgccgaaaaaaacagaccaggcagtctggtgctggcgtgaggctccccagaa 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14007 tatttacctgccgaaaaaaacagaccaggcagtctggtgctggcgtgaggctccccagaa 14066 Query: 749 ggtctaggcccacacagccaaaacgacttcttcgatcactttagtacgagagggcaagcc 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14067 ggtctaggcccacacagccaaaacgacttcttcgatcactttagtacgagagggcaggcc 14126 Query: 809 ccagtcccataagtttgtaactggtaactactattccaaatccgtcatcacgtatgccct 868 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 14127 ccagtcccattagtttgtaactggtaactactattccaatcccgtcatcacgtatg-cct 14185 Query: 869 tcggcaggtacatactaaatgatgagcttatgttttttcccg-aatctctttttgaggta 927 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 14186 tcggcaggtacatactaaatgatgagcttatgttttttcccgaaatctcttcttgaggta 14245 Query: 928 gaataccaagcc-ttggttcatgccctgtt 956 ||||| |||||| ||| |||||||| |||| Sbjct: 14246 gaataacaagccattgtttcatgccttgtt 14275 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5295 Number of Sequences: 1807 Number of extensions: 5295 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)