BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZE08FM1.SCF screened BAC_end
         (970 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1427                                                        1560   0.0  

>3x_Contig1427 
          Length = 10253

 Score = 1560 bits (787), Expect = 0.0
 Identities = 846/861 (98%), Gaps = 4/861 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    tgaagaaattccttgagagagcagaaactcaagagaaacaaattaagaagttcgttcttg 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10168 tgaagaaattccttgagagagcagaaactcaagagaaacaaattaagaagttcgttcttg 10109

                                                                         
Query: 147   aacaacagagaaaatataaatggtcttccaaccaagggccagcttcacgtatatcatcag 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10108 aacaacagagaaaatataaatggtcttccaaccaagggccagcttcacgtatatcatcag 10049

                                                                         
Query: 207   gatcgttgctatttcaggaacatttaccttctgttcgattgaggaagaattcttcagttg 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10048 gatcgttgctatttcaggaacatttaccttctgttcgattgaggaagaattcttcagttg 9989

                                                                         
Query: 267   gctcatacctttcgaaatgtgaaagatatatacacccgtttgcgccgaccgaagttagag 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9988  gctcatacctttcgaaatgtgaaagatatatacacccgtttgcgccgaccgaagttagag 9929

                                                                         
Query: 327   aaatacttctctatgatgttactaaatcgaaagaaaagatcgaaccaccagaatccacta 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9928  aaatacttctctatgatgttactaaatcgaaagaaaagatcgaaccaccagaatccacta 9869

                                                                         
Query: 387   ttcttgtgcatgtacaaaagaaggaccttttcgcagttgtaaatggcggtagaatagcac 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9868  ttcttgtgcatgtacaaaagaaggaccttttcgcagttgtaaatggcggtagaatagcac 9809

                                                                         
Query: 447   ctgatcagttgttggccgtaataaatcaatacgagaacggagggtggaagttgataggcg 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9808  ctgatcagttgttggccgtaataaatcaatacgagaacggagggtggaagttgataggcg 9749

                                                                         
Query: 507   atgtgaacagagatacttacaagattgtcttccagaagaattacatgagaccagcactca 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9748  atgtgaacagagatacttacaagattgtcttccagaagaattacatgagaccagcactca 9689

                                                                         
Query: 567   tagagaccaaaggaaaaatagctatcactttatttggtattaccctaggatacatagccg 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9688  tagagaccaaaggaaaaatagctatcactttatttggtattaccctaggatacatagccg 9629

                                                                         
Query: 627   ttgtccaaccactaatcgactatattaattatttcaatcgataaattaatattgtatact 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9628  ttgtccaaccactaatcgactatattaattatttcaatcgataaattaatattgtatact 9569

                                                                         
Query: 687   gtacaatccgaatgacactcatataggaaaaacagaatttaaaatgtatgaatagttaat 746
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9568  gtacaatccgaatgacactcatataggaaaaacagaattaaaaatgtatgaatagttaat 9509

                                                                         
Query: 747   ctttatatatatatctatagtacaatacccttctgatcaaccgtgtgtgtagaaaatgac 806
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9508  ctttatatatatatctatagtacaatacccttctgatcaaccgtgtgtgtagaaaatgac 9449

                                                                         
Query: 807   attncgaaa-tgatcgacattatcagttcatttcaatggtcttttaattcaccaatagtt 865
             | | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 9448  a-tccgaaattgatcgacattatcagttcatttcaat-gtcttttaattcaccaataggt 9391

                                                                         
Query: 866   tntacaagtttttgttccccccagaaccttttcggctttatcattgatccttatcaattt 925
             | ||| || |||||||||||| |||||||||||| ||||||||||||| ||||||| |||
Sbjct: 9390  tttac-aggttttgttcccccaagaaccttttcgcctttatcattgattcttatcagttt 9332

                                  
Query: 926   taaagtactctaaccttcaaa 946
             |||||||||| ||||| ||||
Sbjct: 9331  taaagtactcaaacctccaaa 9311


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9638
Number of Sequences: 1807
Number of extensions: 9638
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)