BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZE08FM1.SCF screened BAC_end (970 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1427 1560 0.0 >3x_Contig1427 Length = 10253 Score = 1560 bits (787), Expect = 0.0 Identities = 846/861 (98%), Gaps = 4/861 (0%) Strand = Plus / Minus Query: 87 tgaagaaattccttgagagagcagaaactcaagagaaacaaattaagaagttcgttcttg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10168 tgaagaaattccttgagagagcagaaactcaagagaaacaaattaagaagttcgttcttg 10109 Query: 147 aacaacagagaaaatataaatggtcttccaaccaagggccagcttcacgtatatcatcag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10108 aacaacagagaaaatataaatggtcttccaaccaagggccagcttcacgtatatcatcag 10049 Query: 207 gatcgttgctatttcaggaacatttaccttctgttcgattgaggaagaattcttcagttg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10048 gatcgttgctatttcaggaacatttaccttctgttcgattgaggaagaattcttcagttg 9989 Query: 267 gctcatacctttcgaaatgtgaaagatatatacacccgtttgcgccgaccgaagttagag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9988 gctcatacctttcgaaatgtgaaagatatatacacccgtttgcgccgaccgaagttagag 9929 Query: 327 aaatacttctctatgatgttactaaatcgaaagaaaagatcgaaccaccagaatccacta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9928 aaatacttctctatgatgttactaaatcgaaagaaaagatcgaaccaccagaatccacta 9869 Query: 387 ttcttgtgcatgtacaaaagaaggaccttttcgcagttgtaaatggcggtagaatagcac 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9868 ttcttgtgcatgtacaaaagaaggaccttttcgcagttgtaaatggcggtagaatagcac 9809 Query: 447 ctgatcagttgttggccgtaataaatcaatacgagaacggagggtggaagttgataggcg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9808 ctgatcagttgttggccgtaataaatcaatacgagaacggagggtggaagttgataggcg 9749 Query: 507 atgtgaacagagatacttacaagattgtcttccagaagaattacatgagaccagcactca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9748 atgtgaacagagatacttacaagattgtcttccagaagaattacatgagaccagcactca 9689 Query: 567 tagagaccaaaggaaaaatagctatcactttatttggtattaccctaggatacatagccg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9688 tagagaccaaaggaaaaatagctatcactttatttggtattaccctaggatacatagccg 9629 Query: 627 ttgtccaaccactaatcgactatattaattatttcaatcgataaattaatattgtatact 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9628 ttgtccaaccactaatcgactatattaattatttcaatcgataaattaatattgtatact 9569 Query: 687 gtacaatccgaatgacactcatataggaaaaacagaatttaaaatgtatgaatagttaat 746 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9568 gtacaatccgaatgacactcatataggaaaaacagaattaaaaatgtatgaatagttaat 9509 Query: 747 ctttatatatatatctatagtacaatacccttctgatcaaccgtgtgtgtagaaaatgac 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9508 ctttatatatatatctatagtacaatacccttctgatcaaccgtgtgtgtagaaaatgac 9449 Query: 807 attncgaaa-tgatcgacattatcagttcatttcaatggtcttttaattcaccaatagtt 865 | | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 9448 a-tccgaaattgatcgacattatcagttcatttcaat-gtcttttaattcaccaataggt 9391 Query: 866 tntacaagtttttgttccccccagaaccttttcggctttatcattgatccttatcaattt 925 | ||| || |||||||||||| |||||||||||| ||||||||||||| ||||||| ||| Sbjct: 9390 tttac-aggttttgttcccccaagaaccttttcgcctttatcattgattcttatcagttt 9332 Query: 926 taaagtactctaaccttcaaa 946 |||||||||| ||||| |||| Sbjct: 9331 taaagtactcaaacctccaaa 9311 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9638 Number of Sequences: 1807 Number of extensions: 9638 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 970 length of database: 10,358,551 effective HSP length: 16 effective length of query: 954 effective length of database: 10,329,639 effective search space: 9854475606 effective search space used: 9854475606 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)