BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZE08RM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1705 1624 0.0 >3x_Contig1705 Length = 16734 Score = 1624 bits (819), Expect = 0.0 Identities = 902/921 (97%), Gaps = 7/921 (0%) Strand = Plus / Plus Query: 46 gctttaggtcaaaatgatagaggttatccaatactgatatttctacgaaattattatatg 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4231 gctttaggtcaaaatgatagaggttatccaatactgatatttctacgaaattattatatg 4290 Query: 106 cccttacttatgttttgttagttttgaagaatccgtcaattcttcctttacccttagcaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4291 cccttacttatgttttgttagttttgaagaatccgtcaattcttcctttacccttagcaa 4350 Query: 166 cctttggtttcacaactttagccttttgaataggttgtttctttacggtttttgtgccat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4351 cctttggtttcacaactttagccttttgaataggttgtttctttacggtttttgtgccat 4410 Query: 226 ttggaatggctgtagacatagcagctttgataaggagctctctttccctttctgtttgta 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4411 ttggaatggctgtagacatagcagctttgataaggagctctctttccctttctgtttgta 4470 Query: 286 atgtttcgttcttgtacttgtcgtatgagtcgaaacattgtttgatgttaagatttgaag 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4471 atgtttcgttcttgtacttgtcgtatgagtcgaaacattgtttgatgttaagatttgaag 4530 Query: 346 attcatgtctaattagatcctggtatgcgagttgtgggatcaaggaaactagaagattac 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4531 attcatgtctaattagatcctggtatgcgagttgtgggatcaaggaaactagaagattac 4590 Query: 406 acgacattatgcatttcagagatgatgctatatcttcaggtagcgattttggtattttaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4591 acgacattatgcatttcagagatgatgctatatcttcaggtagcgattttggtattttaa 4650 Query: 466 gagaagtagggaagttgttgttgattttgatgactttcttcagtagccattctactatca 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4651 gagaagtagggaagttgttgttgattttgatgactttcttcagtagccattctactatca 4710 Query: 526 tttgaggttcgatacgataatacttgtcaccagcttcttccactgtatgtgatattttcc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4711 tttgaggttcgatacgataatacttgtcaccagcttcttccactgtatgtgatattttcc 4770 Query: 586 cgagacaactttcccataattttggaggtatcttctcccaattttcactgtgattattcg 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4771 cgagacaactttcccataattttggaggtatcttctcccaattttcactgtgattattcg 4830 Query: 646 ttaatttctcttggtaatcagaactagtataaaagttagtatccatatcgagtgcgggtg 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4831 ttaatttctcttggtaatcagaactagtataaaagttagtatccatatcgagtgcgggtg 4890 Query: 706 gaacgcaagggtgt-ataaacgctagatcctcactagtaactttgntgttcctattataa 764 |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 4891 gaacgcaa-ggtgtaataaacgctagatcctcactagtaactttgttgttcctataataa 4949 Query: 765 tacccacatatattaaaagtttagtcatatttttcggcatatagtatcgaaccatcttct 824 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4950 tacccacatatattaaaagttaagtcatatttttcggcatatagtatcgaaccatcttct 5009 Query: 825 agtatgtgtccatcttttcctgttctcttcattgatcaaaaatgtggnattttaatgttt 884 |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 5010 agtatgtgtccatc-tttcctgttctcttcattgatcaaaaatgtgg-atttaaatgttt 5067 Query: 885 gcggatactgaagttttatggatatttatcatttcctaaatctcgcgaccaattatagtn 944 ||| || ||||||| | || ||||||||||||| ||||||||||||| |||||||||| Sbjct: 5068 gcgaat-ctgaagtataat-gatatttatcattcactaaatctcgcgagcaattatagtc 5125 Query: 945 tacatcctttactgaactttt 965 ||| |||||||||||||||| Sbjct: 5126 -acagcctttactgaactttt 5145 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7643 Number of Sequences: 1807 Number of extensions: 7643 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)