BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZE09RM1.SCF screened BAC_end (983 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1303 1554 0.0 >3x_Contig1303 Length = 8112 Score = 1554 bits (784), Expect = 0.0 Identities = 829/839 (98%), Gaps = 4/839 (0%) Strand = Plus / Minus Query: 56 tcaacaaagagtattgatatagggctgttctttgtttgagctattgaattttcctatagt 115 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1758 tcaacaaagagtagtgatatagggctgttctttgtttgagctattgaattttcctatagt 1699 Query: 116 gagtgagtgtttcttgttgaaaagaaaaggtgcaagaaatacttccaaacacaggtttta 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1698 gagtgagtgtttcttgttgaaaagaaaaggtgcaagaaatacttccaaacacaggtttta 1639 Query: 176 agcttgttgtggtttttatttacaagaacgctaatcataatctctttacaagaaattcag 235 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1638 agcttgttgtggtttttatttacaagaacgctaatcataatcactttacaagaaattcag 1579 Query: 236 aaggaatttatcccaattttttcacaggtaaggactgggttttattataattattatttt 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1578 aaggaatttatcccaattttttcacaggtaaggactgggttttattataattattatttt 1519 Query: 296 ttttattgacctttgaactttatcttcccttgtaaaggttaatttgccattgcataagtt 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1518 ttttattgacctttgaactttatcttcccttgtaaaggttaatttgccattgcataagtt 1459 Query: 356 catctatctatagagcgttttgtctccggagtgctaaaatatcacaatgtcagataatgg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1458 catctatctatagagcgttttgtctccggagtgctaaaatatcacaatgtcagataatgg 1399 Query: 416 gccagatttgtggcttgagaagatcaagaaatgtcaggctttgacggagtctgagatgaa 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1398 gccagatttgtggcttgagaagatcaagaaatgtcaggctttgacggagtctgagatgaa 1339 Query: 476 acagctatgcgagatgatgaaggaactcttaatggaagaatcgaatattcagccggttca 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 acagctatgcgagatgatgaaggaactcttaatggaagaatcgaatattcagccggttca 1279 Query: 536 atcgccggtgactgtttgtggtgatattcacggacaatttcatgaccttttagaactatt 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1278 atcgccggtgactgtttgtggtgatattcacggacaatttcatgaccttttagaactatt 1219 Query: 596 cagaactgctggtgggtttcctgatcaagtaaactatatttttcttggtgactatgtaga 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1218 cagaactgctggtgggtttcctgatcaagtaaactatatttttcttggtgactatgtaga 1159 Query: 656 tcgtggttattacagtttggagacgttcacacttcttatgtgtttgaaagtgaaatatcc 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1158 tcgtggttattacagtttggagacgttcacacttcttatgtgtttgaaagtgaaatatcc 1099 Query: 716 ttccagaattactttggttagaggaaatcatgagtcgaggcanattacacaagtttatgg 775 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1098 ttccagaattactttggttagaggaaatcatgagtcgaggcaaattacacaagtttatgg 1039 Query: 776 gttttatgaggaatgtttaaaatagtatggtttcacaacgggtttggaagtattgttgtc 835 ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||| Sbjct: 1038 gttttatgaggaatgtttaaataagtatggttccacaac-ggtttggaagtattgttgtc 980 Query: 836 aagtgttttgatttctttaactttggcagctattattgacggggaaaattttatgtgtg 894 ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 979 aagtg-tttgatttc-ttaactttggcagctattattgac-gggaaaattttatgtgtg 924 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9186 Number of Sequences: 1807 Number of extensions: 9186 Number of successful extensions: 82 Number of sequences better than 1.0e-20: 1 length of query: 983 length of database: 10,358,551 effective HSP length: 16 effective length of query: 967 effective length of database: 10,329,639 effective search space: 9988760913 effective search space used: 9988760913 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)