BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZE10FM1.SCF screened BAC_end
         (948 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1779                                                        1419   0.0  

>3x_Contig1779 
          Length = 24855

 Score = 1419 bits (716), Expect = 0.0
 Identities = 832/863 (96%), Gaps = 7/863 (0%)
 Strand = Plus / Minus

                                                                         
Query: 93    aacagtggtctctaccaactctttcaatttctcaagaggatttgcattttctaacattgg 152
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13734 aacagtggtctctaccaactctttcaatttctcaagaggatttgcattttctaacattgg 13675

                                                                         
Query: 153   atcgagtaaaacctctttcacgagtatcattaaatcattagaatcaacctcttcggtctt 212
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13674 atcgagtaaaacctctttcacgagtatcattaaatcattagaatcaacctcttcggtctt 13615

                                                                         
Query: 213   ctgtttcaacagatctgaaataactggaaccatttgtgcaaactgataaatcttgagaac 272
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13614 ctgtttcaacagatctgaaataactggaaccatttgtgcaaactgataaatcttgagaac 13555

                                                                         
Query: 273   atcttctaagttcccatttttttgaagtttctttgttagtctgcggatatctggaacact 332
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13554 atcttctaagttcccatttttttgaagtttctttgttagtctgcggatatctggaacact 13495

                                                                         
Query: 333   aggtaagcattcttcttgtagagaagatcttaattctaactgatccatgaaaaattcaac 392
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13494 aggtaagcattcttcttgtagagaagatcttaattctaactgatccatgaaaaattcaac 13435

                                                                         
Query: 393   tagatcatgccttttggtaatctggtcgatgtcggtcaagggttgcttcagccactcgtt 452
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13434 tagatcatgccttttggtaatctggtcgatgtcggtcaagggttgcttcagccactcgtt 13375

                                                                         
Query: 453   caacaaccttacgccggaattagttttacatctattcaacaactggaaaagacttgaaca 512
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13374 caacaaccttacgccggaattagttttacatctattcaacaactggaaaagacttgaaca 13315

                                                                         
Query: 513   tttttgaggagagccgacgcttaaaagagcagtattaccctgtgagcctgtggggaacac 572
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13314 tttttgaggagagccgacgcttaaaagagcagtattaccctgtgagcctgtggggaacac 13255

                                                                         
Query: 573   atttagtgctttgattgcagaagcat--ctaactttacaaattgcgaaagagagtgatcc 630
             ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 13254 atttagtgctttgattgcagaagcatacgtaactttacaaattgcgaaagagagtgatcc 13195

                                                                         
Query: 631   acaacttcaaagtttccaacgttggccttgttattcattatggttaggtagttcaataag 690
             |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 13194 acaacttcaaagtttccaacgttggcctcgttattcattatgtttaggtagttcaataag 13135

                                                                         
Query: 691   acactacttgcacctagacagtttgcagaaaactttgacactgataaggattaattatta 750
             ||||||| ||||||||||||||||||||||||||||||||||||||||||| | | || |
Sbjct: 13134 acactacatgcacctagacagtttgcagaaaactttgacactgataaggataattcatca 13075

                                                                         
Query: 751   cccgcaagctttgctaaatcggcttc-acgtc-tttccgtttaagtcgcttagctt-aca 807
             ||   ||||||||||||||||||||| ||||| |||||||| ||||||||  |||| |||
Sbjct: 13074 ccgcaaagctttgctaaatcggcttcaacgtcttttccgttaaagtcgctaggcttaaca 13015

                                                                         
Query: 808   aaggatgcgacacaagaacagcgatcaatgacgctcaatatcttcttt-aatcatttgcc 866
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 13014 aaggatgcgacacaagaacagcgatcaatgacgctcaatatcttctttaaatcatttgcc 12955

                                                                         
Query: 867   ttactagatttatcacgcaattctggaattaaacattcttttat-ccaagttgaattaaa 925
              ||||||  ||||||||||| |||||||||| |||||| ||||| |||||||||||||||
Sbjct: 12954 atactaggattatcacgcaaatctggaattagacattcctttataccaagttgaattaaa 12895

                                    
Query: 926   caccttttatagttagagaaaac 948
             || ||||   |||||||||||||
Sbjct: 12894 caactttctaagttagagaaaac 12872


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6959
Number of Sequences: 1807
Number of extensions: 6959
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)