BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZE10FM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1779 1419 0.0 >3x_Contig1779 Length = 24855 Score = 1419 bits (716), Expect = 0.0 Identities = 832/863 (96%), Gaps = 7/863 (0%) Strand = Plus / Minus Query: 93 aacagtggtctctaccaactctttcaatttctcaagaggatttgcattttctaacattgg 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13734 aacagtggtctctaccaactctttcaatttctcaagaggatttgcattttctaacattgg 13675 Query: 153 atcgagtaaaacctctttcacgagtatcattaaatcattagaatcaacctcttcggtctt 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13674 atcgagtaaaacctctttcacgagtatcattaaatcattagaatcaacctcttcggtctt 13615 Query: 213 ctgtttcaacagatctgaaataactggaaccatttgtgcaaactgataaatcttgagaac 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13614 ctgtttcaacagatctgaaataactggaaccatttgtgcaaactgataaatcttgagaac 13555 Query: 273 atcttctaagttcccatttttttgaagtttctttgttagtctgcggatatctggaacact 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13554 atcttctaagttcccatttttttgaagtttctttgttagtctgcggatatctggaacact 13495 Query: 333 aggtaagcattcttcttgtagagaagatcttaattctaactgatccatgaaaaattcaac 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13494 aggtaagcattcttcttgtagagaagatcttaattctaactgatccatgaaaaattcaac 13435 Query: 393 tagatcatgccttttggtaatctggtcgatgtcggtcaagggttgcttcagccactcgtt 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13434 tagatcatgccttttggtaatctggtcgatgtcggtcaagggttgcttcagccactcgtt 13375 Query: 453 caacaaccttacgccggaattagttttacatctattcaacaactggaaaagacttgaaca 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13374 caacaaccttacgccggaattagttttacatctattcaacaactggaaaagacttgaaca 13315 Query: 513 tttttgaggagagccgacgcttaaaagagcagtattaccctgtgagcctgtggggaacac 572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13314 tttttgaggagagccgacgcttaaaagagcagtattaccctgtgagcctgtggggaacac 13255 Query: 573 atttagtgctttgattgcagaagcat--ctaactttacaaattgcgaaagagagtgatcc 630 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 13254 atttagtgctttgattgcagaagcatacgtaactttacaaattgcgaaagagagtgatcc 13195 Query: 631 acaacttcaaagtttccaacgttggccttgttattcattatggttaggtagttcaataag 690 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 13194 acaacttcaaagtttccaacgttggcctcgttattcattatgtttaggtagttcaataag 13135 Query: 691 acactacttgcacctagacagtttgcagaaaactttgacactgataaggattaattatta 750 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | | || | Sbjct: 13134 acactacatgcacctagacagtttgcagaaaactttgacactgataaggataattcatca 13075 Query: 751 cccgcaagctttgctaaatcggcttc-acgtc-tttccgtttaagtcgcttagctt-aca 807 || ||||||||||||||||||||| ||||| |||||||| |||||||| |||| ||| Sbjct: 13074 ccgcaaagctttgctaaatcggcttcaacgtcttttccgttaaagtcgctaggcttaaca 13015 Query: 808 aaggatgcgacacaagaacagcgatcaatgacgctcaatatcttcttt-aatcatttgcc 866 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 13014 aaggatgcgacacaagaacagcgatcaatgacgctcaatatcttctttaaatcatttgcc 12955 Query: 867 ttactagatttatcacgcaattctggaattaaacattcttttat-ccaagttgaattaaa 925 |||||| ||||||||||| |||||||||| |||||| ||||| ||||||||||||||| Sbjct: 12954 atactaggattatcacgcaaatctggaattagacattcctttataccaagttgaattaaa 12895 Query: 926 caccttttatagttagagaaaac 948 || |||| ||||||||||||| Sbjct: 12894 caactttctaagttagagaaaac 12872 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6959 Number of Sequences: 1807 Number of extensions: 6959 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)