BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZF12FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig842 1653 0.0 >3x_Contig842 Length = 3899 Score = 1653 bits (834), Expect = 0.0 Identities = 879/889 (98%), Gaps = 5/889 (0%) Strand = Plus / Minus Query: 86 tgaaggatcactttttggcccataatacacatcaggagtggaaaaaggatccactacttc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 tgaaggatcactttttggcccataatacacatcaggagtggaaaaaggatccactacttc 1732 Query: 146 ttctaatgaagaagttcttctatgtctagaacgtggtgggttattatttactttgccatc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1731 ttctaatgaagaagttcttctatgtctagaacgtggtgggttattatttactttgccatc 1672 Query: 206 cattatgtatgatctattgcactgccaggataaagcgtgtcgctgacgcccgtatattat 265 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1671 cattatgtatgatctattgcactgccaggataaagcgtgtc-ctgacgcccgtatattat 1613 Query: 266 actgaaaagatatccagttttccctatattatctttagggattaaatgatatcaatcctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1612 actgaaaagatatccagttttccctatattatctttagggattaaatgatatcaatcctt 1553 Query: 326 cgctaaagggtaccttcaacgtttgtgcaattagtaaaatatattattcagttgcgattc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1552 cgctaaagggtaccttcaacgtttgtgcaattagtaaaatatattattcagttgcgattc 1493 Query: 386 acacagaatgcttatgaatagattgctagtttctgtcctaatgcactcaagtgaaacaga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1492 acacagaatgcttatgaatagattgctagtttctgtcctaatgcactcaagtgaaacaga 1433 Query: 446 agctctgacttggacacttcactgtttgaagataaaactaagtgaggaaggtccgtgtat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1432 agctctgacttggacacttcactgtttgaagataaaactaagtgaggaaggtccgtgtat 1373 Query: 506 atatacacaataccttgaatcggataaataacaaggtagacgtttctttaattgtccttt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1372 atatacacaataccttgaatcggataaataacaaggtagacgtttctttaattgtccttt 1313 Query: 566 ccctttttttttttctttctatgctttatgaagcttttcttttcatctctttccttttga 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1312 ccctttttttttttctttctatgctttatgaagcttttcttttcatctctttccttttga 1253 Query: 626 tcctttccaatatacaggaatcctctcttcttgtttctttataattacggataaacttcg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1252 tcctttccaatatacaggaatcctctcttcttgtttctttataattacggataaacttcg 1193 Query: 686 acatcaccgctacgcaggtttctgcagagttcggatgatctgcggacttttgcaatgcaa 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1192 acatcaccgctacgcaggtttctgcagagttcggatgatctgcggacttttgcaatgcaa 1133 Query: 746 cacctgatgagtatcgagtagccaagacgtagtcaattgac-acggggataccaaacaga 804 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1132 cacctgatgagtatcgagtagccaagacgtagtcaattgacaacggggataccaaacaga 1073 Query: 805 tccccaggtatcctgctggtaattacttttcgatgcacaaattttaaacttgttagatgt 864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 tccccaggtatcctgctggtaattacttttcgatgcacaaattttaaacttgttagatgt 1013 Query: 865 ggtattgattctcacacattttatcaccggacgtttcttttgat-atcgagctttgcctt 923 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 1012 ggtattgattctcacacattttatcaccggacggttcttttgataatcgagctttgcctt 953 Query: 924 tcgttaggaa--tggaacagctgcgatgggtatgttctgatagaaaaaa 970 ||||| ||| || |||||||||||||| ||||||||||||||||||| Sbjct: 952 tcgtttagaaattgaaacagctgcgatggttatgttctgatagaaaaaa 904 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,823 Number of Sequences: 1807 Number of extensions: 12823 Number of successful extensions: 138 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)