BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZG12FM1.SCF screened BAC_end
         (980 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig533                                                         1647   0.0  

>3x_Contig533 
          Length = 2268

 Score = 1647 bits (831), Expect = 0.0
 Identities = 874/885 (98%), Gaps = 3/885 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534  cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 593

                                                                        
Query: 147  ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594  ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 653

                                                                        
Query: 207  aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654  aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 713

                                                                        
Query: 267  cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714  cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 773

                                                                        
Query: 327  gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774  gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 833

                                                                        
Query: 387  tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834  tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 893

                                                                        
Query: 447  cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894  cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 953

                                                                        
Query: 507  aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954  aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 1013

                                                                        
Query: 567  caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 1073

                                                                        
Query: 627  tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 1133

                                                                        
Query: 687  gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccng 746
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1134 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccgg 1193

                                                                        
Query: 747  aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaanaagctga 806
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1194 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaaaaagctga 1253

                                                                        
Query: 807  ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttg 866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttg 1313

                                                                        
Query: 867  ctgtatacagtcatgcgcatatataggtgttataatacgaacaaaaa-ttctattatata 925
            ||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||
Sbjct: 1314 ctgtatacagtcatgcgcatatataggtgtataaatacgaacaaaaatttctattatata 1373

                                                         
Query: 926  ttatg-atattgagcggcttttgattaaaagcta-ttagaccttt 968
            ||||| |||||||||||||||  || |||||||| ||||||||||
Sbjct: 1374 ttatgcatattgagcggctttgaataaaaagctatttagaccttt 1418


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8468
Number of Sequences: 1807
Number of extensions: 8468
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)