BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZG12FM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig533 1647 0.0 >3x_Contig533 Length = 2268 Score = 1647 bits (831), Expect = 0.0 Identities = 874/885 (98%), Gaps = 3/885 (0%) Strand = Plus / Plus Query: 87 cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 cctgctcttctgttttatatttaaaggtaaccttgaaatttgaagcagttacagaaaatg 593 Query: 147 ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 ttaataacaaatattgcgttcacatacaaactgttactcaaacaaagagagtacaattgg 653 Query: 207 aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 aacaaattacacttaaaccgccaattaccaatcaataaatcaaattaacatgtcagttca 713 Query: 267 cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 cactccagaagttttatgggctcaacgttcaagcgaatccgatgataccaagaacaattt 773 Query: 327 gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 gttcattaccatcaatattccagactgtacgaaccctaaaatggaattaaccgaaaattc 833 Query: 387 tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 tttggaattcagtgcactatctaagtatcacagtaaagatgggatcaaataccatttgca 893 Query: 447 cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 cattgacttctacaagccaattgatacggaaaactcggagcagagggtagctaacggtag 953 Query: 507 aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 aaactactttttggtgttaaggaagaaagatttaggccttgaatactggcccagattgac 1013 Query: 567 caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 caaggagaagcttaagtatcattacattaaaaccgactttgataaatgggttgacgaaga 1073 Query: 627 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 tgaacaagaagagaatgttgctgctgataacgacttgatgtcacaatttggccaaatggg 1133 Query: 687 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccng 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1134 gggcgctggcttccctggaatggaacaaggtttcaatccacaagccttcgctgacgccgg 1193 Query: 747 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaanaagctga 806 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1194 aatcaacctggatgaggcattaccagaagaagatgatgaagatgacgaagaaaaagctga 1253 Query: 807 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttg 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1254 ataggtatgatcggatggtctgcaaaggcgatttctatcaagatttaattcatttatttg 1313 Query: 867 ctgtatacagtcatgcgcatatataggtgttataatacgaacaaaaa-ttctattatata 925 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1314 ctgtatacagtcatgcgcatatataggtgtataaatacgaacaaaaatttctattatata 1373 Query: 926 ttatg-atattgagcggcttttgattaaaagcta-ttagaccttt 968 ||||| ||||||||||||||| || |||||||| |||||||||| Sbjct: 1374 ttatgcatattgagcggctttgaataaaaagctatttagaccttt 1418 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8468 Number of Sequences: 1807 Number of extensions: 8468 Number of successful extensions: 121 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)