BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZH01RM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig589 1400 0.0 >3x_Contig589 Length = 2261 Score = 1400 bits (706), Expect = 0.0 Identities = 827/854 (96%), Gaps = 12/854 (1%) Strand = Plus / Minus Query: 103 tcatctgctggttcaccgtcatctgtgaagtcggcttcttcatcactatcttcaatgaat 162 |||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||| Sbjct: 2260 tcatctgctggt-caccgtcatctgt-aagtcggctc--tcatcactatcttca-tgaat 2206 Query: 163 tcttttgaaagtggtctggacttacctctcttagagtcaccattttgaactccgttcaat 222 ||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||| Sbjct: 2205 tcttt-gaaagtggtctggact-acctctcttaga-tcaccattttga-ctccgttcaat 2150 Query: 223 tgatcatcatcctcatcatcttcatcaacgatttttttggcagttcttctctttttcttt 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2149 tgatcatcatcctcatcatcttcatcaacgatttttttggcagttcttctctttttcttt 2090 Query: 283 gaagatttactatcagagtctgcttttctctttgctttcttccctttcttagatggtgct 342 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2089 gaagatttactatcagagtctgcttttctctttgctttcttccctgtcttagatggtgct 2030 Query: 343 ttataagacccgtcttcttcttgaggtaggtcatcgttgtcattgtcgtcatcaacaatc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2029 ttataagacccgtcttcttcttgaggtaggtcatcgttgtcattgtcgtcatcaacaatc 1970 Query: 403 tcctcttgcgcggtacgttcttggatcaacctttgtgcttcttcttgcaattttctgtat 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 tcctcttgcgcggtacgttcttggatcaacctttgtgcttcttcttgcaattttctgtat 1910 Query: 463 tcctccgccagtttttcacttttgatcttttcttcttccttctgttgggcgtccctttga 522 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1909 tcctccgccagtttttcactgttgatcttttcttcttccttctgttgggcgtccctttga 1850 Query: 523 gcttcaagctcacgttgttcttccaaaactttacgagcattttccattttggctgagatt 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1849 gcttcaagctcacgttgttcttccaaaactttacgagcattttccattttggctgagatt 1790 Query: 583 tccaattcatacgccttttggtcttctatactgcgctctagtgctgttttcatggtggtc 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1789 tccaattcatacgccttttggtcttctatactgcgctctagtgctgttttcatggtggtc 1730 Query: 643 tcacctagttgaatacgttgctctaattgttctgaaggaattactatggatttagtttcc 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1729 tcacctagttgaatacgttgctctaattgttctgaaggaattactatggatttagtttcc 1670 Query: 703 agaagttcttttaataatgaaataccgtattgcaacccctcaatactggcttcaagaatc 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1669 agaagttcttttaataatgaaataccgtattgcaacccctcaatactggcttcaag-atc 1611 Query: 763 agccatggttctttctttaggactagatcttctcatttgctncggcacttggaattccca 822 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 1610 agccatggttctttctttaggactagatcttctcatttgctcggcaacttggaattccaa 1551 Query: 823 atatgcaagggtgaacttatagctactggtcatcttacccgttactttcgcagattctaa 882 |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1550 taatgcaaggttgaacttatagctactggtcatcttaccgtttactttcgcagattctaa 1491 Query: 883 atcatacgcacg-ttgacataaccaancgctttctgaacagcttc-agagacctttcctt 940 |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 1490 atcatacgcacgtttgacataaccaagcgctttctgaacagcttcaagagacctttcctt 1431 Query: 941 ganagctcttagat 954 || ||||||||||| Sbjct: 1430 gagagctcttagat 1417 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9360 Number of Sequences: 1807 Number of extensions: 9360 Number of successful extensions: 128 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)