BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZH03RM1.SCF screened BAC_end (990 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1731 0.0 >3x_Contig1770 Length = 29267 Score = 1731 bits (873), Expect = 0.0 Identities = 928/944 (98%), Gaps = 3/944 (0%) Strand = Plus / Plus Query: 48 tctttaggtgcgactgcacttgcgttgcaaggtgggtcacttttcggattattccacctc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21524 tctttaggtgcgactgcacttgcgttgcaaggtgggtcacttttcggattattccacctc 21583 Query: 108 ggcgtattgaagggattgttggataggaatcttttacccaatatcatcaacgggacctcg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21584 ggcgtattgaagggattgttggataggaatcttttacccaatatcatcaacgggacctcg 21643 Query: 168 atgggcgcatgcgtcgcaagcatggcatgttgtctcagcgatggagagttgtaagatcta 227 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 21644 atgggcgcatgcgtcgcaagcatggcatgttgtctcagcgatggagagttggaagatcta 21703 Query: 228 ttgaccggaaacagacttgtatctacaattaaacgcgatacagcgttaatgaaagaatgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21704 ttgaccggaaacagacttgtatctacaattaaacgcgatacagcgttaatgaaagaatgt 21763 Query: 288 ggatacggcaacattgatgagcatttcaacatcggaactttagtagaaaatgtggtgcac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21764 ggatacggcaacattgatgagcatttcaacatcggaactttagtagaaaatgtggtgcac 21823 Query: 348 aatggatactcaaaagacgtgtatctatttattaaattcattcaaaagtcggtcatcgga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21824 aatggatactcaaaagacgtgtatctatttattaaattcattcaaaagtcggtcatcgga 21883 Query: 408 gatctaacttttgaagaggcgttccaaaggactgggaaggtattaaacattgttgttcat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21884 gatctaacttttgaagaggcgttccaaaggactgggaaggtattaaacattgttgttcat 21943 Query: 468 cccacgaataagaatatatgtcctaatttgttgaactatgtgacgaccccgaacgttctt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21944 cccacgaataagaatatatgtcctaatttgttgaactatgtgacgaccccgaacgttctt 22003 Query: 528 atatctagtgctattgattgtagtttcggaacaaacacaatcagtaagaatacttggcta 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22004 atatctagtgctattgattgtagtttcggaacaaacacaatcagtaagaatacttggcta 22063 Query: 588 ttgggtaaaaacatagaaaacaaaatagtggactatttggatagaaaagagccccattac 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22064 ttgggtaaaaacatagaaaacaaaatagtggactatttggatagaaaagagccccattac 22123 Query: 648 caggagttgaaattttcggcaccacaatacgttcaggattcgagccaattggaggcccca 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22124 caggagttgaaattttcggcaccacaatacgttcaggattcgagccaattggaggcccca 22183 Query: 708 tataccagactcacggaattattcaatgtaaacaatnttattgtttccttagcaagaccc 767 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22184 tataccagactcacggaattattcaatgtaaacaattttattgtttccttagcaagaccc 22243 Query: 768 tatttggcaccattagcattgaacgacttanaacacgatattagaacgtctgagtactat 827 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22244 tatttggcaccattagcattgaacgacttaaaacacgatattagaacgtctgagtactat 22303 Query: 828 tactaccangagttcccatacatcgnatcca-gatcatattcaccaatgcaactatccca 886 |||||| | |||||||||||||| ||||| |||||||||||||||||||||||| ||| Sbjct: 22304 tactacaagaggttcccatacatcg-atccaggatcatattcaccaatgcaactat-cca 22361 Query: 887 gggttaccaaattggaaccattagcattcaaatttaaataccacttggnaaggaagatga 946 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 22362 aggttaccaaattggaaccattagcattcaaatttaaataccacttggaaaggaagatga 22421 Query: 947 agcatatactcactatggnaactaagcatagagtagagatcatg 990 |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 22422 agcatatactcactatggaactaaagcatagagtagagatcatg 22465 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6069 Number of Sequences: 1807 Number of extensions: 6069 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 990 length of database: 10,358,551 effective HSP length: 16 effective length of query: 974 effective length of database: 10,329,639 effective search space: 10061068386 effective search space used: 10061068386 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)