BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZH05FM1.SCF screened BAC_end
         (963 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1159                                                        1538   0.0  

>3x_Contig1159 
          Length = 4873

 Score = 1538 bits (776), Expect = 0.0
 Identities = 810/819 (98%), Gaps = 2/819 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 1411

                                                                        
Query: 148  acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 1351

                                                                        
Query: 208  tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 1291

                                                                        
Query: 268  gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 1231

                                                                        
Query: 328  ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 1171

                                                                        
Query: 388  ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 1111

                                                                        
Query: 448  taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 1051

                                                                        
Query: 508  gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 991

                                                                        
Query: 568  acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990  acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 931

                                                                        
Query: 628  ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930  ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 871

                                                                        
Query: 688  actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870  actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 811

                                                                        
Query: 748  tccctacctatgaacatattgctctatggaccattttacaactattttgatgtcacaacg 807
            |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 810  tccctacctatgaacatattgctctatggaccattttacaactatttgaatgtcacaacg 751

                                                                        
Query: 808  aaaccattttacagttaattaaagaagatcanaaactcgtcaacgggggtcaagaaaatc 867
            |||||||||   ||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 750  aaaccatttacaagttaattaaagaagatcaaaaactcgtcaac-ggggtcaagaaaatc 692

                                                   
Query: 868  gctgatgaaaactacgctgtggcttaggaaatacatgca 906
            ||||||||||||||||||||||| |||| ||||||||||
Sbjct: 691  gctgatgaaaactacgctgtggc-tagggaatacatgca 654


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7226
Number of Sequences: 1807
Number of extensions: 7226
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)