BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZH05FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1159 1538 0.0 >3x_Contig1159 Length = 4873 Score = 1538 bits (776), Expect = 0.0 Identities = 810/819 (98%), Gaps = 2/819 (0%) Strand = Plus / Minus Query: 88 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 tatctttgatgaactctacttcacctcgtgtgaaatgtcaagctactttggccttgagaa 1411 Query: 148 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 acttagcttcagataccaactaccaattggagattgttagagctggtggattaccagact 1351 Query: 208 tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 tggttcaattgattcagtcggattctttaccattagtcttggccagcgtcgcatgtatca 1291 Query: 268 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 gaaatatttccatccatccattaaacgaaggtctaattgtagatgccggatttctaccac 1231 Query: 328 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 ctttagtaaaattgcttgattaccaagaatcagaagaaattcaatgtcatgctgtttcaa 1171 Query: 388 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 ctttaagaaacttggctgcttcatctgaaaaaaatagagcagagttcttccaatctggtg 1111 Query: 448 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 taattgaaaaattcaagcaacttgccttgacatgtcccatcagcgttcaaagtgaaatta 1051 Query: 508 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 gtgcttgctttgctatcttggcactttcagataatactaaatatgatcttttgcaacaag 991 Query: 568 acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 acgtactaaaagttttgatcccaatgacaatgtcccaggaccaagagatctctggtaact 931 Query: 628 ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 ctgctgctgctgtagcaaacttgatctctagggtcagcaatttagagaaaatattggagt 871 Query: 688 actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 actggggtcaaccaaacgatggtatcaagggtttcttgatcagattcttgtctagtgact 811 Query: 748 tccctacctatgaacatattgctctatggaccattttacaactattttgatgtcacaacg 807 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 810 tccctacctatgaacatattgctctatggaccattttacaactatttgaatgtcacaacg 751 Query: 808 aaaccattttacagttaattaaagaagatcanaaactcgtcaacgggggtcaagaaaatc 867 ||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 750 aaaccatttacaagttaattaaagaagatcaaaaactcgtcaac-ggggtcaagaaaatc 692 Query: 868 gctgatgaaaactacgctgtggcttaggaaatacatgca 906 ||||||||||||||||||||||| |||| |||||||||| Sbjct: 691 gctgatgaaaactacgctgtggc-tagggaatacatgca 654 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7226 Number of Sequences: 1807 Number of extensions: 7226 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)