BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC22ZH06FM1.SCF screened BAC_end
         (969 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1210                                                        1606   0.0  

>3x_Contig1210 
          Length = 6392

 Score = 1606 bits (810), Expect = 0.0
 Identities = 858/868 (98%), Gaps = 5/868 (0%)
 Strand = Plus / Minus

                                                                        
Query: 89   gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5459 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 5400

                                                                        
Query: 149  agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 5340

                                                                        
Query: 209  catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 5280

                                                                        
Query: 269  cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 5220

                                                                        
Query: 329  gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 5160

                                                                        
Query: 389  tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 5100

                                                                        
Query: 449  tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 5040

                                                                        
Query: 509  accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 4980

                                                                        
Query: 569  ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4979 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 4920

                                                                        
Query: 629  gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 4860

                                                                        
Query: 689  accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4859 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 4800

                                                                        
Query: 749  tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 4740

                                                                        
Query: 809  aaaagaacttcgatttgtgggacaccctttggagctggtgggataccagac-aagtgaag 867
            |||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4739 aaagaaacttcgatttgtgggacaccctttggagctggtgggataccagacaaagtgaag 4680

                                                                        
Query: 868  ttaccgatcaacttgttgtctctgaccaa-tctctttcaccttgg-aaacnctga-ttcc 924
            ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||||
Sbjct: 4679 ttaccgatcaacttgttgtctctgaccaattctctttcaccttggaaaactctgatttcc 4620

                                        
Query: 925  acgnagttttgaccagc-gcagcagtgg 951
            ||| || |||||||||| ||||||||||
Sbjct: 4619 acggaggtttgaccagcagcagcagtgg 4592


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8064
Number of Sequences: 1807
Number of extensions: 8064
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)