BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZH06FM1.SCF screened BAC_end (969 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1210 1606 0.0 >3x_Contig1210 Length = 6392 Score = 1606 bits (810), Expect = 0.0 Identities = 858/868 (98%), Gaps = 5/868 (0%) Strand = Plus / Minus Query: 89 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5459 gtgaataaattgtgagacaaagaaaaaaaagtaagaagagaaaaagttgtaaaacccttc 5400 Query: 149 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5399 agtaatactaaaagagtcatcaaagaaaccgtgtcctaccacgtcaatagtttcggttaa 5340 Query: 209 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5339 catctttaattaaaatgggaggttggtcataacaaatatcattatatcttggtagatttt 5280 Query: 269 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5279 cgatggaactttatcattcttctcgaacggaaggaactaaagagagtagtgtctgggcat 5220 Query: 329 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5219 gtttcaatgatatcgtatctctcagctaattacacttattgctttggttcaccaccttgt 5160 Query: 389 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5159 tggttagaagcgtcgttcttgtacatttgttcgaacaacttcatggaagcggtttgtaat 5100 Query: 449 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5099 tcttcagtcttggtcttcaactcttcagcgtcgacttcttcaccggcttgaactctagcg 5040 Query: 509 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5039 accaattctctcaaagcagcgacttggtccttaaccttttgagcttcagccttgtccaat 4980 Query: 569 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4979 ttttcttcgaattccttcaaagaagcttcggtatcgttggccaattggtcacccttgttg 4920 Query: 629 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4919 gcggtttcaatagccttctttctggtttcatcttgttctctgaacttttcagcatcgcta 4860 Query: 689 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4859 accatttgctcgatttcagattcggacaaaccggaagaaccagcaacagtgatggaagca 4800 Query: 749 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4799 tccttgttggaagccttgtctctagcagagacgttgatgataccatcggcatcaatatcg 4740 Query: 809 aaaagaacttcgatttgtgggacaccctttggagctggtgggataccagac-aagtgaag 867 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4739 aaagaaacttcgatttgtgggacaccctttggagctggtgggataccagacaaagtgaag 4680 Query: 868 ttaccgatcaacttgttgtctctgaccaa-tctctttcaccttgg-aaacnctga-ttcc 924 ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| Sbjct: 4679 ttaccgatcaacttgttgtctctgaccaattctctttcaccttggaaaactctgatttcc 4620 Query: 925 acgnagttttgaccagc-gcagcagtgg 951 ||| || |||||||||| |||||||||| Sbjct: 4619 acggaggtttgaccagcagcagcagtgg 4592 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8064 Number of Sequences: 1807 Number of extensions: 8064 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 969 length of database: 10,358,551 effective HSP length: 16 effective length of query: 953 effective length of database: 10,329,639 effective search space: 9844145967 effective search space used: 9844145967 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)