BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZH06RM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1340 1663 0.0 >3x_Contig1340 Length = 7156 Score = 1663 bits (839), Expect = 0.0 Identities = 906/921 (98%), Gaps = 6/921 (0%) Strand = Plus / Plus Query: 48 taaagatcccattgaaaaaaagg-cagaaattaaaatatccgggtaacgaaatatttatt 106 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4718 taaagatcccattgaaaaaaagggcagaaattaaaatatccgggtaacgaaatatttatt 4777 Query: 107 tcattaaaatcgatatactatttacttataatatacgtatagtttagtggtatagatcta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4778 tcattaaaatcgatatactatttacttataatatacgtatagtttagtggtatagatcta 4837 Query: 167 tggtacagtggtgggtgtggtaataataatgatatcaaatcattaattctctagctcctt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4838 tggtacagtggtgggtgtggtaataataatgatatcaaatcattaattctctagctcctt 4897 Query: 227 tttcaattccttggtgaaatcatcctctacttcgatatcgtcccagtcttcagcccaaag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4898 tttcaattccttggtgaaatcatcctctacttcgatatcgtcccagtcttcagcccaaag 4957 Query: 287 gtttgaatcttttgttagatcttgtgaaacaggttgcgatggccaagaatcagctgggaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4958 gtttgaatcttttgttagatcttgtgaaacaggttgcgatggccaagaatcagctgggaa 5017 Query: 347 atcctcgaattcatcgtcatcctcaagagaagattttcttggttctttatttgacatctt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5018 atcctcgaattcatcgtcatcctcaagagaagattttcttggttctttatttgacatctt 5077 Query: 407 ttcgcttgtacaacgctgatgtatcaggtcaaagtgtatatcaggggctgtatatatctt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5078 ttcgcttgtacaacgctgatgtatcaggtcaaagtgtatatcaggggctgtatatatctt 5137 Query: 467 gagtgaatctatatgtagtattacttataaggtttgccactatttcagacctttttgtag 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 gagtgaatctatatgtagtattacttataaggtttgccactatttcagacctttttgtag 5197 Query: 527 cttttggatgattgtttattggtccgggtaatgaaacggctttgacagcataaaagacag 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5198 cttttggatgattgtttattggtccgggtaatgaaacggctttgacagcataaaagacag 5257 Query: 587 gacacattgaggccaaacgcaaagggtggtaaatcgttgtgcagagtgtattaatgcatc 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5258 gacacattgaggccaaacgcaaagggtggtaaatcgttgtgcagagtgtattaatgcatc 5317 Query: 647 gcctcagtacaatatatcccaaaaattagggaccgtcaaatcacctagctctctgtaatc 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5318 gcctcagtacaatatatcccaaaaattagggaccgtcaaatcacctagctctctgtaatc 5377 Query: 707 catgtgttagccttttctatgatttatagttgtcacccacacaccacacgtttaatattc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5378 catgtgttagccttttctatgatttatagttgtcacccacacaccacacgtttaatattc 5437 Query: 767 aattgtaaaag-aaaaaagtttgaaaaaattctggatcagaagaattgggaaagaattca 825 ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 5438 aattgtaaaagaaaaaaagtttgaaaaaattctggatcagaagaattggaaagaaatcca 5497 Query: 826 cgatgagcttaaagctgtctaattc-attgattcaatgaggctacatatttgatattcta 884 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5498 cgatgagcttaaagctgtctaattcaattgattcaatgaggctacatatttgatattcta 5557 Query: 885 tttcatcc-gntgattntgttggcagtcattgtgggcaatc-atttttactcaatcttgc 942 ||||||| | ||||| |||||||||||| ||||| |||| |||||||||||||||||| Sbjct: 5558 -ttcatccggttgattttgttggcagtcagtgtggcaaatcaatttttactcaatcttgc 5616 Query: 943 tagagatatcaaagtggaatt 963 ||||||||||||||||||||| Sbjct: 5617 tagagatatcaaagtggaatt 5637 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8901 Number of Sequences: 1807 Number of extensions: 8901 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)