BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC22ZH10RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1327 1665 0.0 >3x_Contig1327 Length = 7237 Score = 1665 bits (840), Expect = 0.0 Identities = 902/918 (98%), Gaps = 5/918 (0%) Strand = Plus / Minus Query: 49 tttgatgatttgattatcctctggatggtacaattcgtatgctaattggaagaacgtgga 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1803 tttgatgatttgattatcctctggatggtacaattcgtatgctaattggaagaacgtgga 1744 Query: 109 atacgcaccggcagagatcccaccaacggaaattttatctgggttaccaccaaagtattt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1743 atacgcaccggcagagatcccaccaacggaaattttatctgggttaccaccaaagtattt 1684 Query: 169 gatgtacttgtaagtccattcaatggccaaacgttgatcccagaatccaaaattggaaga 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 gatgtacttgtaagtccattcaatggccaaacgttgatcccagaatccaaaattggaaga 1624 Query: 229 agcttcatcttcttccaagagttctttaccagagaggaacccaaacatgtttaacctata 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1623 agcttcatcttcttccaagagttctttaccagagaggaacccaaacatgtttaacctata 1564 Query: 289 acctggtgttactagaatgtatttctgggtaaattcttcatcgtcgaacatctcattggt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1563 acctggtgttactagaatgtatttctgggtaaattcttcatcgtcgaacatctcattggt 1504 Query: 349 attgaagaattcgctgtaaggagaagagtattgcaaccatccaccatgaatatagactag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1503 attgaagaattcgctgtaaggagaagagtattgcaaccatccaccatgaatatagactag 1444 Query: 409 tacaggccaaccatcggattccttatatttatcacttgagggaacccatatgttcaactt 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1443 tacaggccaaccatcggattccttatatttatcacttgagggaacccatatgttcaactt 1384 Query: 469 gttaatgttctcatctgatggggacttagtgtacctgaatgcagggttaggaacacttgg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1383 gttaatgttctcatctgatggggacttagtgtacctgaatgcagggttaggaacacttgg 1324 Query: 529 ttgagggcatttcaacccaaattccttatagtcacctgtataatcgaaatcatctgctaa 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1323 ttgagggcatttcaacccaaattccttatagtcacctgtataatcgaaatcatctgctaa 1264 Query: 589 tgggaccggcctcttaaaccgattttccttggtgaaaggttccgcatacggaatctgagc 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1263 tgggaccggcctcttaaaccgattttccttggtgaaaggttccgcatacggaatctgagc 1204 Query: 649 gaacctgtgtgttgtgacattgtttgtccttggtgatttgaaagtgtaacctgtcaaagt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1203 gaacctgtgtgttgtgacattgtttgtccttggtgatttgaaagtgtaacctgtcaaagt 1144 Query: 709 tccttgacctgngattgaaatagggaaaggcgtggtaccttcagtagaaacaacttgtcc 768 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 tccttgacctgggattgaaatagggaaaggcgtggtaccttcagtagaaacaacttgtcc 1084 Query: 769 catgctgntgntgcgttgacttccttgngtattctgttacttgccttatacttcttaaga 828 ||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1083 catgctgttgttgcgttgacttccttgtgtattctgttacttgccttatacttcttaaga 1024 Query: 829 tcatcaaatac-acttggtaatagctncaattgtcacgcttat-tatatatatgtgggcc 886 ||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| | Sbjct: 1023 tcatc-aatacaacttggtaatagctccaattgtcacgcttatatatatatatgtggcct 965 Query: 887 tatgaaaatgcagcangggttcagtatacttacccatatcttaaatgccagac-aagcac 945 |||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 964 aatgaaaatgcagcaatggttcagtatac-tacccatatcttaaatggcagacaaagcac 906 Query: 946 tcaaatcaaacaacagac 963 |||||||||||||||||| Sbjct: 905 tcaaatcaaacaacagac 888 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6843 Number of Sequences: 1807 Number of extensions: 6843 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)