BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZA01RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1294 1098 0.0 >3x_Contig1294 Length = 6938 Score = 1098 bits (554), Expect = 0.0 Identities = 584/594 (98%) Strand = Plus / Plus Query: 50 catcgatgatgatgactgtaagaggatgcatactgagaacatggttcgcaaatcctcaaa 109 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 catcgatgatgatgactataagaggatgcatactgagaacatggttcgcaaatcctcaaa 1132 Query: 110 gtcaaaacaaattttgatttctagacctccaccattgttatctgttcacatcaaccggtc 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 gtcaaaacaaattttgatttctagacctccaccattgttatctgttcacatcaaccggtc 1192 Query: 170 cgtttttgaccctcgcacttatatgatcaggaaaaataactcaagagttatattcaaaag 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 cgtttttgaccctcgcacttatatgatcaggaaaaataactcaagagttatattcaaaag 1252 Query: 230 caaattgaatctatcaccttggtgttgcaattatgataagattaatcttgatgcacgtct 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 caaattgaatctatcaccttggtgttgcaattatgataagattaatcttgatgcacgtct 1312 Query: 290 tccgatgtccaagaagcaagagaactggcacgaatcatccgaagatgacaataatggaac 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1313 tccgatgtccaagaagcaagagaactggcacgaatcatccgaagatgacaataatggaac 1372 Query: 350 tgaatactacaataagttgcatcgcagatttgaaaaagaatttgaagacagcgatgaaga 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1373 tgaatactacaataagttgcatcgcagatttgaaaaagaatttgaagacagcgatgaaga 1432 Query: 410 ggaggatggaagtgataatggtcaaggaatgttcaatggatcttcaagaatggtggaaga 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1433 ggaggatggaagtgataatggtcaaggaatgttcaatggatcttcaagaatggtggaaga 1492 Query: 470 gcatgatgttttgaatggtgaattaagttcggcatcggtgtcatcattcgaagacgatat 529 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 1493 gcatgatgttttgaatggtgaattaagttcggcatcgttgtcatcatccgaagacgatat 1552 Query: 530 tgctgaagtcgaagaggtggagtttgatgccctttggaatacaatcgtaataaagactgc 589 |||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||||| Sbjct: 1553 tgctgaagtcgaagaggtggagttagatgcccttggaaatacaatcgtaaaaaagactgc 1612 Query: 590 caaaaaaccatttttaggtggcaattaagatgtgtctatctccagaggtaacct 643 |||||||||||| |||||||||||| |||||||||||||||||||||| ||||| Sbjct: 1613 caaaaaaccattattaggtggcaatcaagatgtgtctatctccagaggaaacct 1666 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,298 Number of Sequences: 1807 Number of extensions: 14298 Number of successful extensions: 82 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)