BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZA04RM1.SCF screened BAC_end
         (997 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1507                                                         264   3e-70

>3x_Contig1507 
          Length = 11359

 Score =  264 bits (133), Expect = 3e-70
 Identities = 177/192 (92%)
 Strand = Plus / Plus

                                                                        
Query: 91   tgttgcaaatgtggtgaaaaaattaacgatcttaggtatgcaaagacaaagaaagggtta 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7581 tgttgcaaatgtggtgaaaaaattaacgatcttaggtatgcaaagacaaagaaagggtta 7640

                                                                        
Query: 151  ttctgtataacttgtcatgaacgacttttagccaggaagaagttctttgaggagaagaag 210
            ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||
Sbjct: 7641 ttctgtataacttgtcatgaacgacttttagccaggaagaagtaccatgaggagaagaag 7700

                                                                        
Query: 211  cgaagactaaagaaacagtcgccgatctttttttttttcaaangaccagactcctctttt 270
            ||||||||||||||||||| ||||||| ||   |    ||||  |||||||||||||| |
Sbjct: 7701 cgaagactaaagaaacagttgccgatcgttccatcgcccaaattaccagactcctcttct 7760

                        
Query: 271  tcacttgacccg 282
            ||||||||||||
Sbjct: 7761 tcacttgacccg 7772


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,645
Number of Sequences: 1807
Number of extensions: 23645
Number of successful extensions: 408
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)