BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZA04RM1.SCF screened BAC_end (997 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1507 264 3e-70 >3x_Contig1507 Length = 11359 Score = 264 bits (133), Expect = 3e-70 Identities = 177/192 (92%) Strand = Plus / Plus Query: 91 tgttgcaaatgtggtgaaaaaattaacgatcttaggtatgcaaagacaaagaaagggtta 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7581 tgttgcaaatgtggtgaaaaaattaacgatcttaggtatgcaaagacaaagaaagggtta 7640 Query: 151 ttctgtataacttgtcatgaacgacttttagccaggaagaagttctttgaggagaagaag 210 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 7641 ttctgtataacttgtcatgaacgacttttagccaggaagaagtaccatgaggagaagaag 7700 Query: 211 cgaagactaaagaaacagtcgccgatctttttttttttcaaangaccagactcctctttt 270 ||||||||||||||||||| ||||||| || | |||| |||||||||||||| | Sbjct: 7701 cgaagactaaagaaacagttgccgatcgttccatcgcccaaattaccagactcctcttct 7760 Query: 271 tcacttgacccg 282 |||||||||||| Sbjct: 7761 tcacttgacccg 7772 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 23,645 Number of Sequences: 1807 Number of extensions: 23645 Number of successful extensions: 408 Number of sequences better than 1.0e-20: 1 length of query: 997 length of database: 10,358,551 effective HSP length: 16 effective length of query: 981 effective length of database: 10,329,639 effective search space: 10133375859 effective search space used: 10133375859 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)