BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZA09RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1070 0.0 >3x_Contig1647 Length = 14353 Score = 1070 bits (540), Expect = 0.0 Identities = 682/716 (95%), Gaps = 10/716 (1%) Strand = Plus / Plus Query: 47 tctcacggtgataattttgtttca-tttgggtcgctttgggattagcagtttctctaact 105 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 4553 tctcacggtgataattttgttccaatttgggtcgctttgggattagcagtttctctaact 4612 Query: 106 ttagtttgcgccttccttatgtctgaatctagacatgaaatggccaggttaaagtcccaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4613 ttagtttgcgccttccttatgtctgaatctagacatgaaatggccaggttaaagtcccaa 4672 Query: 166 actaagttcctgagacgaagggagagcatcaatagtgccagatcacggctttcatatatg 225 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 4673 actaagttcctgagacgaagggagagcatcaatagtgccagatcacggcaatcagatatg 4732 Query: 226 gcaggtggagccaatcggtcatatacagtactgaaatatactgctctacaattcttcgac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4733 gcaggtggagccaatcggtcatatacagtactgaaatatactgctctacaattcttcgac 4792 Query: 286 tttttgtctccagtgagaaatttatggattgctcctactgccgccggttccttggttcca 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4793 tttttgtctccagtgagaaatttatggattgctcctactgccgccggttccttggttcca 4852 Query: 346 agatacatggttttattgcttgttggaatagatatcatgtttgtcatatctacagcggca 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4853 agatacatggttttattgcttgttggaatagatatcatgtttgtcatatctacagcggca 4912 Query: 406 tctataccggcgattgttttagcctttgttttcatgttcggttggagttcagagcaatta 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4913 tctataccggcgattgttttagcctttgttttcatgttcggttggagttcagagcaatta 4972 Query: 466 ggttactttgtgtctttaatgggactcggcaaggctgctgctttattagttcttgcaccg 525 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4973 ggttactttgtgtctttaatgggactcggcaaggctgctgctttattagttctcgcaccg 5032 Query: 526 ctggcactacatcttttgaagaaacgattcaaaacgttatcaaaattctggggaccacac 585 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 5033 ctggcactacatcttttgaagaaacgattcaaaacgttatcaaaa-tctgtggaccacac 5091 Query: 586 agacatgggttgaacctacgggtatctttccttttttattctactttcgctagtagtatt 645 |||||| ||||| | ||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 5092 agacat-ggttgta-ctacgtgtttc-ttccttttttattctactttcgctagtagtatt 5148 Query: 646 agtgattagtccgaagggaatccccttgattacctatccgttcttcttcaaatacttggg 705 |||||||||| ||||| |||||| | || ||| ||| |||||| || ||||||| |||| Sbjct: 5149 agtgattagt-cgaagtgaatccgc-tgcatacgtatacgttctcctacaaatac-tggg 5205 Query: 706 aagcttgctattccccaacagggcattcccccagttttcaaatcgggatcgaaaag 761 |||| ||||| |||||||||| ||| | || ||||| |||||| ||||||||||| Sbjct: 5206 aagcatgcta-tccccaacagtgcaat-ccacagttatcaaatacggatcgaaaag 5259 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6412 Number of Sequences: 1807 Number of extensions: 6412 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)