BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZA10FM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1360 1154 0.0 >3x_Contig1360 Length = 8285 Score = 1154 bits (582), Expect = 0.0 Identities = 651/670 (97%), Gaps = 3/670 (0%) Strand = Plus / Minus Query: 86 ttccttgactgaaaagattaaggttaagatagtttaaacattacaagatgacttcagaaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3968 ttccttgactgaaaagattaaggttaagatagtttaaacattacaagatgacttcagaaa 3909 Query: 146 taaaagaaaaagaacaatttgaaatcggcgtcgttggtgacactgagactggatccatcg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3908 taaaagaaaaagaacaatttgaaatcggcgtcgttggtgacactgagactggatccatcg 3849 Query: 206 aggtttatgatggataaatcaaaaacgttaaatcacaacaattggaaggtactga-gcat 264 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3848 aggtttatgatggagaaatcaaaaacgttaaatcacaacaattggaaggtactgaagcat 3789 Query: 265 gctgttggccttgatctcttccaagaagttttggacagtgacttgaaatacgatgacaaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3788 gctgttggccttgatctcttccaagaagttttggacagtgacttgaaatacgatgacaaa 3729 Query: 325 gagtactccaaaatcagacgtaagattgatacctggttattaccagtgctttgtatcaca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3728 gagtactccaaaatcagacgtaagattgatacctggttattaccagtgctttgtatcaca 3669 Query: 385 tacatgcttcagttcttggataagttatcgttgaattatgcttctgcatattccatgaag 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3668 tacatgcttcagttcttggataagttatcgttgaattatgcttctgcatattccatgaag 3609 Query: 445 gaggatcttggtcttgttgggaatgagtacggtaatattgccgctatcttcaatgtcggg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3608 gaggatcttggtcttgttgggaatgagtacggtaatattgccgctatcttcaatgtcggg 3549 Query: 505 tatttgatcggttccattccagcaaactacgttattcaaaaacttccagtggccaaatac 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3548 tatttgatcggttccattccagcaaactacgttattcaaaaacttccagtggccaaatac 3489 Query: 565 acaggtgtcgccttattcgttcgggcaattttgttgattggacatatcggagctacgaac 624 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 3488 acaggtgtcgccttattcgtttgggcaattttgttgattggacatattggagctacgaac 3429 Query: 625 tactccataacgatggcatttgagattcttattacgattgatggaagcatcaatctctcc 684 ||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3428 tactcatcaatgatggca-ttgagattcttattaggattgatggaagcatcaatctctcc 3370 Query: 685 attcaatatgatgatgtgtgccctgttttacaatcagtagataacaaccattccgatagt 744 || ||||||||||||||||||| |||||||||| || ||| ||||||||||| || || Sbjct: 3369 atccaatatgatgatgtgtgccatgttttacaa-caagagagaacaaccattcagaatgt 3311 Query: 745 gtacattttt 754 |||||||||| Sbjct: 3310 gtacattttt 3301 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7829 Number of Sequences: 1807 Number of extensions: 7829 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)