BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZB02RM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1527                                                        1566   0.0  

>3x_Contig1527 
          Length = 8131

 Score = 1566 bits (790), Expect = 0.0
 Identities = 822/830 (99%), Gaps = 2/830 (0%)
 Strand = Plus / Minus

                                                                        
Query: 52   gcttcctcatcatcacagatgagtggagcattcagctcttctgcagaaggatatggacct 111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6717 gcttcctcatcatcacagatgagtggagcattcagctcttctgcagaaggatatggacct 6658

                                                                        
Query: 112  gtacccatcacagacacttcggtatatgattgttagaagatggtaatagagcggtgtacc 171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6657 gtacccatcacagacacttcggtatatgattgttagaagatggtaatagagcggtgtacc 6598

                                                                        
Query: 172  tatagtatgtctatgataggccagtacgtttaggttgtgacccacgtcttaacaataaca 231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6597 tatagtatgtctatgataggccagtacgtttaggttgtgacccacgtcttaacaataaca 6538

                                                                        
Query: 232  ttaactcttactcgaagcggttttttcagtttcataaacaccggaaaatctaaaaacata 291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6537 ttaactcttactcgaagcggttttttcagtttcataaacaccggaaaatctaaaaacata 6478

                                                                        
Query: 292  tcaaaaattagttacatacacgtaggtgcgtacaagtggggacatatttataaaagatac 351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6477 tcaaaaattagttacatacacgtaggtgcgtacaagtggggacatatttataaaagatac 6418

                                                                        
Query: 352  cctagcgacattaaacaccaaaagagaaaaagtgaaggaaatgagctgaatatctacact 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6417 cctagcgacattaaacaccaaaagagaaaaagtgaaggaaatgagctgaatatctacact 6358

                                                                        
Query: 412  gatgctagaacccttgaaaaagggtaaggaatcaggaagaaaaacaactctaagaaatat 471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6357 gatgctagaacccttgaaaaagggtaaggaatcaggaagaaaaacaactctaagaaatat 6298

                                                                        
Query: 472  tagtagttaaagtgtgactcaagaagtgaaagcttaattaaaggcctctgtagaatagag 531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6297 tagtagttaaagtgtgactcaagaagtgaaagcttaattaaaggcctctgtagaatagag 6238

                                                                        
Query: 532  aaaagtattaggatcgaaaaaggacgatttggaacaatttctatgctaagagatgtgttt 591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6237 aaaagtattaggatcgaaaaaggacgatttggaacaatttctatgctaagagatgtgttt 6178

                                                                        
Query: 592  atccggaacacatttcacaagcttctgggttatcaatagcacaagcaataaccttggagt 651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6177 atccggaacacatttcacaagcttctgggttatcaatagcacaagcaataaccttggagt 6118

                                                                        
Query: 652  tgaaaatatcgaactcactagcgtcggttggggcttgtttaacatcctcggcatcctttg 711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6117 tgaaaatatcgaactcactagcgtcggttggggcttgtttaacatcctcggcatcctttg 6058

                                                                        
Query: 712  ctgactcggcaggagtaactggagtgactggttgagtgtcatcaatttttagggatgcta 771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6057 ctgactcggcaggagtaactggagtgactggttgagtgtcatcaatttttagggatgcta 5998

                                                                        
Query: 772  cgctgtttacgatagattctttact-gatggagctggagaaacttttttgtaagccttc- 829
            ||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||| | 
Sbjct: 5997 cgctgtttacgatagattcttcactagatggagctggagaaacttctttgaaagcctcca 5938

                                                              
Query: 830  caaccggtgtcacattttggtcattgacactggctttatgaggaatgtaa 879
            || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5937 cagccggtgtcacactttggtcattgacactggctttatgaggaatgtaa 5888


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6327
Number of Sequences: 1807
Number of extensions: 6327
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)