BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZB02RM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1527 1566 0.0 >3x_Contig1527 Length = 8131 Score = 1566 bits (790), Expect = 0.0 Identities = 822/830 (99%), Gaps = 2/830 (0%) Strand = Plus / Minus Query: 52 gcttcctcatcatcacagatgagtggagcattcagctcttctgcagaaggatatggacct 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6717 gcttcctcatcatcacagatgagtggagcattcagctcttctgcagaaggatatggacct 6658 Query: 112 gtacccatcacagacacttcggtatatgattgttagaagatggtaatagagcggtgtacc 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6657 gtacccatcacagacacttcggtatatgattgttagaagatggtaatagagcggtgtacc 6598 Query: 172 tatagtatgtctatgataggccagtacgtttaggttgtgacccacgtcttaacaataaca 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6597 tatagtatgtctatgataggccagtacgtttaggttgtgacccacgtcttaacaataaca 6538 Query: 232 ttaactcttactcgaagcggttttttcagtttcataaacaccggaaaatctaaaaacata 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6537 ttaactcttactcgaagcggttttttcagtttcataaacaccggaaaatctaaaaacata 6478 Query: 292 tcaaaaattagttacatacacgtaggtgcgtacaagtggggacatatttataaaagatac 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6477 tcaaaaattagttacatacacgtaggtgcgtacaagtggggacatatttataaaagatac 6418 Query: 352 cctagcgacattaaacaccaaaagagaaaaagtgaaggaaatgagctgaatatctacact 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6417 cctagcgacattaaacaccaaaagagaaaaagtgaaggaaatgagctgaatatctacact 6358 Query: 412 gatgctagaacccttgaaaaagggtaaggaatcaggaagaaaaacaactctaagaaatat 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6357 gatgctagaacccttgaaaaagggtaaggaatcaggaagaaaaacaactctaagaaatat 6298 Query: 472 tagtagttaaagtgtgactcaagaagtgaaagcttaattaaaggcctctgtagaatagag 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6297 tagtagttaaagtgtgactcaagaagtgaaagcttaattaaaggcctctgtagaatagag 6238 Query: 532 aaaagtattaggatcgaaaaaggacgatttggaacaatttctatgctaagagatgtgttt 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6237 aaaagtattaggatcgaaaaaggacgatttggaacaatttctatgctaagagatgtgttt 6178 Query: 592 atccggaacacatttcacaagcttctgggttatcaatagcacaagcaataaccttggagt 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6177 atccggaacacatttcacaagcttctgggttatcaatagcacaagcaataaccttggagt 6118 Query: 652 tgaaaatatcgaactcactagcgtcggttggggcttgtttaacatcctcggcatcctttg 711 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6117 tgaaaatatcgaactcactagcgtcggttggggcttgtttaacatcctcggcatcctttg 6058 Query: 712 ctgactcggcaggagtaactggagtgactggttgagtgtcatcaatttttagggatgcta 771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6057 ctgactcggcaggagtaactggagtgactggttgagtgtcatcaatttttagggatgcta 5998 Query: 772 cgctgtttacgatagattctttact-gatggagctggagaaacttttttgtaagccttc- 829 ||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||| | Sbjct: 5997 cgctgtttacgatagattcttcactagatggagctggagaaacttctttgaaagcctcca 5938 Query: 830 caaccggtgtcacattttggtcattgacactggctttatgaggaatgtaa 879 || ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5937 cagccggtgtcacactttggtcattgacactggctttatgaggaatgtaa 5888 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6327 Number of Sequences: 1807 Number of extensions: 6327 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)