BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZB08RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1238 1354 0.0 >3x_Contig1238 Length = 5289 Score = 1354 bits (683), Expect = 0.0 Identities = 772/795 (97%), Gaps = 5/795 (0%) Strand = Plus / Plus Query: 44 gcttaagctcaattctaatgtctatattgttgatggttcatcggaaactgatccggacgg 103 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3000 gcttaagctcaattctaatgtcaatattgttgatggttcatcggaaactgatccggacgg 3059 Query: 104 cagaaaagaggaaactgaaggactttctcaaactgaagaccttgttgaacttccctgctg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3060 cagaaaagaggaaactgaaggactttctcaaactgaagaccttgttgaacttccctgctg 3119 Query: 164 gattttggatatgctccctgacgatatattatccatgattatagacatggttgttttatt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3120 gattttggatatgctccctgacgatatattatccatgattatagacatggttgtgttaag 3179 Query: 224 ctcagcagactcgtggatgaacctatctttgacttgtaaaaagtttaatttgctatgctt 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3180 ctcagcagactcgtggatgaacctatctttgacttgtaaaaagtttaatttgctatgctt 3239 Query: 284 ccacgattcctcaccgtaccggactttcgcggaatacatctataagaagcaagtatacaa 343 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3240 ccacgattcctcac-gtaccggactttcgcggaatacatctataagaagcaagtatacaa 3298 Query: 344 cgaaaatgagatgaggctaaacggtatatcagatatacaagcactagcagaaaccgtatg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3299 cgaaaatgagatgaggctaaacggtatatcagatatacaagcactagcagaaaccgtatg 3358 Query: 404 gggtcaaaattatagaaagatgctaaaggaacggccgtatatcaagttccatggaatata 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3359 gggtcaaaattatagaaagatgctaaaggaacggccgtatatcaagttccatggaatata 3418 Query: 464 tatcagtgtggtgaattatttgaggcacggatcgatcccggaaggatcatcttcgctgtt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3419 tatcagtgtggtgaattatttgaggcacggatcgatcccggaaggatcatcttcgctgtt 3478 Query: 524 gaacccaatccacatgatcacttattacaggtacttcagattctatccagatggaagatg 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3479 gaacccaatccacatgatcacttattacaggtacttcagattctatccagatggaagatg 3538 Query: 584 cattagattattgactactgacgaaccaaatatagtggtacctggtttctctttagaaag 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3539 cattagattattgactactgacgaaccaaatatagtggtacctggtttctctttagaaag 3598 Query: 644 atgtttctgaaagaaaagactcagatatatgttcgggggtccctgtcattagacgaccgg 703 ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||| | Sbjct: 3599 atg-ttctgaaagaaaagactcagatatatgttc-gtggtccctgtcattagacgacggc 3656 Query: 704 cttgatcagttgacaattaagaggattagaagaatagatgggcttgaatttaacgagatc 763 ||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 3657 cttgatcagttgacaatcaagaggaatagaagaaaagatgggcttgaatttaacgagatc 3716 Query: 764 ttgaaaatct-aaacagaggtcacatgaagtttcacaagttggaaagggttggcttcttc 822 |||||||||| |||||||||||||| |||||| |||||| |||| || | |||||||| Sbjct: 3717 ttgaaaatctcaaacagaggtcacaagaagttcagcaagtt-gaaatggattgcttcttc 3775 Query: 823 tgccacgaggcaaga 837 ||| ||||||||||| Sbjct: 3776 tgcaacgaggcaaga 3790 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6495 Number of Sequences: 1807 Number of extensions: 6495 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)