BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZC03RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1239 0.0 >3x_Contig1770 Length = 29267 Score = 1239 bits (625), Expect = 0.0 Identities = 725/747 (97%), Gaps = 9/747 (1%) Strand = Plus / Plus Query: 42 cagccttccaa-caggtgtcactgatagtgaacggaacataatcatactgagtttccgag 100 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19133 cagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttccgag 19192 Query: 101 tcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagcaatc 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19193 tcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagcaatc 19252 Query: 161 tttgacacttaagtatagaaactgcgggaaccagtataactaccattttcggaacgatga 220 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 19253 tttgacacttaagtatagaaactgcgggaaccagtataactaccaagc-cggaacgatga 19311 Query: 221 cagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctgcca 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19312 cagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctgcca 19371 Query: 281 gatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgctgcc 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19372 gatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgctgcc 19431 Query: 341 gaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcgacgg 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19432 gaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcgacgg 19491 Query: 401 gaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacggac 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19492 gaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacggac 19551 Query: 461 tcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaattgaa 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19552 tcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaattgaa 19611 Query: 521 accttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgatata 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19612 accttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgatata 19671 Query: 581 taatgatattcgatagtatacacacacattctatatggngacagaaagtttttcttcata 640 |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| Sbjct: 19672 taatgatattcgatagtatacacacacattctatatggggacag-aagtatttcttcata 19730 Query: 641 ngtatgggctgcacggtcttcttcatcatagattgtgaacggtttatcgtgtcctaccat 700 |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 19731 ggtat-ggctgcac-gtcttctccatcatagattgtgaacggtttatcgtgtcctacaat 19788 Query: 701 ggcatgggataagttccttggtactcaaagtttcgtcttttcaaagaagtgtcttaaagc 760 |||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||| Sbjct: 19789 ggcaatggataagtt-cttggtactcaaagtttcgtc-tttcaaag-agtgtcttagagc 19845 Query: 761 ctctacttccgggcttgaacaactcat 787 |||||| |||| |||||| |||||||| Sbjct: 19846 ctctac-tccgtgcttgatcaactcat 19871 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6090 Number of Sequences: 1807 Number of extensions: 6090 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)