BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZC04RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1719 1289 0.0 >3x_Contig1719 Length = 15804 Score = 1289 bits (650), Expect = 0.0 Identities = 720/738 (97%), Gaps = 4/738 (0%) Strand = Plus / Plus Query: 62 ttttttaggtctgctgactctaggctaatagtcaatgtacccttcggttgagaatagttg 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ttttttaggcctgctgactctaggctaatagtcaatgtacccttcggttgagaatagttg 776 Query: 122 tggagcaaggtacataaagtgcagcaagattcttggtaggatataagttaggtatatttt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 tggagcaaggtacataaagtgcagcaagattcttggtaggatataagttaggtatatttt 836 Query: 182 tacataacggttgtttcgttatggatattacaagtagtttttagaagttactgtcattgg 241 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 837 tacataacggttgtttcgttatggatattacaagtagtttcgagaagttactgtcattgg 896 Query: 242 agatgttgtttgtcctcttttcattttaatgtcttaatatagtaaatgacactttaaatt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 agatgttgtttgtcctcttttcattttaatgtcttaatatagtaaatgacactttaaatt 956 Query: 302 accgaatgggatttaaaccattttctgactccaaggctcgaacaaagatttacaaacttt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 accgaatgggatttaaaccattttctgactccaaggctcgaacaaagatttacaaacttt 1016 Query: 362 aaacacttgctgtaatatcccaccgatctgttcatagagcggcgttcttacaatccgttg 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 aaacacttgctgtaatatcccaccgatctgttcatagagcggcgttcttacaatccgttg 1076 Query: 422 gacagcaaaatccagcatatattctcttaacctggtaccgtattatggtggacgatattg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 gacagcaaaatccagcatatattctcttaacctggtaccgtattatggtggacgatattg 1136 Query: 482 tacgatcttcctcaccgcagcgagatagcagtgtcgaagatgtgtattcggatttgtact 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 tacgatcttcctcaccgcagcgagatagcagtgtcgaagatgtgtattcggatttgtact 1196 Query: 542 ccactttctctcagatgaccaccaccactgcaaatgatattgaacaacgaccatacccat 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1197 ccactttctctcagatgaccaccaccactgcaaatgatattgaacaacgaccatacccat 1256 Query: 602 tcacatggaggacgggtattatgtttgttagttcgac-attggtgggatgcttttttgtt 660 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1257 tcacatggaggacgggtattatgtttgttagttcgacaattggtgggatgcttttcggtt 1316 Query: 661 accatactggtgtaattttctggggtttttattgcaatgaatccaaaggatttaaacttt 720 || |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1317 acgatactggtgtaa-tttctggggttttaatagcaatgaatccaaaggatttaaacttt 1375 Query: 721 cataatttggaaattt-gccaaaggaaataatcacttctataaactttgctgggtcattc 779 |||| ||||||||||| || ||||||||||||||||||||||| | |||||| |||||| Sbjct: 1376 catagtttggaaatttggcaaaaggaaataatcacttctataacatgtgctggttcattc 1435 Query: 780 ataggaatcgataatagc 797 ||||| |||||||||||| Sbjct: 1436 atagg-atcgataatagc 1452 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6845 Number of Sequences: 1807 Number of extensions: 6845 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)