BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZC08FM1.SCF screened BAC_end
         (898 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1486                                                        1407   0.0  

>3x_Contig1486 
          Length = 12131

 Score = 1407 bits (710), Expect = 0.0
 Identities = 782/798 (97%), Gaps = 6/798 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ccaccaagggtaaatgggtgaaaaacgttccaacttgtggaactagttgatctagccttg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8908 ccaccaagggtaaatgggtgaaaaacgttccaacttgtggaactagttgatctagccttg 8849

                                                                        
Query: 147  cttcttctagagatcccaactgcctacgcctgttctggatttcaatcttttgggaaacca 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8848 cttcttctagagatcccaactgcctacgcctgttctggatttcaatcttttgggaaacca 8789

                                                                        
Query: 207  aattttcaatatctctgaatatgctacagtactgcttataggtcctttcagcacctgaat 266
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8788 aattttcaatatcgctgaatatgctacagtactgcttataggtcctttcagcacctgaat 8729

                                                                        
Query: 267  ctgttcccgcttgcaacacgaagggcaccgccaacaaccctttaatccattcgataaagg 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8728 ctgttcccgcttgcaacacgaagggcaccgccaacaaccctttaatccattcgataaagg 8669

                                                                        
Query: 327  cgtccttcttatgaaccttaaggttatactcaactctatacctgctagacatccggttca 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8668 cgtccttcttatgaaccttaaggttatactcaactctatacctgctagacatccggttca 8609

                                                                        
Query: 387  ggttcagttttaatttttcggattgattggtaactgcgaatgacggttatgttgacagat 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8608 ggttcagttttaatttttcggattgattggtaactgcgaatgacggttatgttgacagat 8549

                                                                        
Query: 447  ggatccatatcatttcccaacagtttacttcaccaagtctttttcatatattggttgtgc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8548 ggatccatatcatttcccaacagtttacttcaccaagtctttttcatatattggttgtgc 8489

                                                                        
Query: 507  attctttatataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgac 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8488 attctttatataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgac 8429

                                                                        
Query: 567  gatataataataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8428 gatataataataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaac 8369

                                                                        
Query: 627  ccactctttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcg 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8368 ccactctttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcg 8309

                                                                        
Query: 687  ctcctatccctgc-agtaacgatgggaacgtgctttcttcatgtatggaacgcttgctgg 745
            ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8308 ctcctat-cctgcaagtaacgatgggaacgtgctttcttcatgtatggaacgcttgctgg 8250

                                                                        
Query: 746  cccttttttcaacctcgaaaggaattaggtgctgaaaatagaaagaaccctgtttttaaa 805
            ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||| 
Sbjct: 8249 cccttttttcaacctcg-aaggaatagggtgctgaaaatagaaggaaccctgtttttaag 8191

                                                                        
Query: 806  ggaaaactgaatgaaaagaaaaaaa-aaagtaactcgaagagccttcttagtgcccgcca 864
            ||||||||||||||||||||||||| || ||||||||||||  | |||||||| ||||||
Sbjct: 8190 ggaaaactgaatgaaaagaaaaaaagaaggtaactcgaagatgcatcttagtg-ccgcca 8132

                              
Query: 865  ctaataattaaccctttt 882
            || |||| ||||||||||
Sbjct: 8131 ct-ataagtaaccctttt 8115


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7784
Number of Sequences: 1807
Number of extensions: 7784
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)