BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZC08FM1.SCF screened BAC_end (898 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1407 0.0 >3x_Contig1486 Length = 12131 Score = 1407 bits (710), Expect = 0.0 Identities = 782/798 (97%), Gaps = 6/798 (0%) Strand = Plus / Minus Query: 87 ccaccaagggtaaatgggtgaaaaacgttccaacttgtggaactagttgatctagccttg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8908 ccaccaagggtaaatgggtgaaaaacgttccaacttgtggaactagttgatctagccttg 8849 Query: 147 cttcttctagagatcccaactgcctacgcctgttctggatttcaatcttttgggaaacca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8848 cttcttctagagatcccaactgcctacgcctgttctggatttcaatcttttgggaaacca 8789 Query: 207 aattttcaatatctctgaatatgctacagtactgcttataggtcctttcagcacctgaat 266 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8788 aattttcaatatcgctgaatatgctacagtactgcttataggtcctttcagcacctgaat 8729 Query: 267 ctgttcccgcttgcaacacgaagggcaccgccaacaaccctttaatccattcgataaagg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8728 ctgttcccgcttgcaacacgaagggcaccgccaacaaccctttaatccattcgataaagg 8669 Query: 327 cgtccttcttatgaaccttaaggttatactcaactctatacctgctagacatccggttca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8668 cgtccttcttatgaaccttaaggttatactcaactctatacctgctagacatccggttca 8609 Query: 387 ggttcagttttaatttttcggattgattggtaactgcgaatgacggttatgttgacagat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8608 ggttcagttttaatttttcggattgattggtaactgcgaatgacggttatgttgacagat 8549 Query: 447 ggatccatatcatttcccaacagtttacttcaccaagtctttttcatatattggttgtgc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8548 ggatccatatcatttcccaacagtttacttcaccaagtctttttcatatattggttgtgc 8489 Query: 507 attctttatataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8488 attctttatataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgac 8429 Query: 567 gatataataataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaac 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8428 gatataataataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaac 8369 Query: 627 ccactctttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8368 ccactctttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcg 8309 Query: 687 ctcctatccctgc-agtaacgatgggaacgtgctttcttcatgtatggaacgcttgctgg 745 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8308 ctcctat-cctgcaagtaacgatgggaacgtgctttcttcatgtatggaacgcttgctgg 8250 Query: 746 cccttttttcaacctcgaaaggaattaggtgctgaaaatagaaagaaccctgtttttaaa 805 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| Sbjct: 8249 cccttttttcaacctcg-aaggaatagggtgctgaaaatagaaggaaccctgtttttaag 8191 Query: 806 ggaaaactgaatgaaaagaaaaaaa-aaagtaactcgaagagccttcttagtgcccgcca 864 ||||||||||||||||||||||||| || |||||||||||| | |||||||| |||||| Sbjct: 8190 ggaaaactgaatgaaaagaaaaaaagaaggtaactcgaagatgcatcttagtg-ccgcca 8132 Query: 865 ctaataattaaccctttt 882 || |||| |||||||||| Sbjct: 8131 ct-ataagtaaccctttt 8115 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7784 Number of Sequences: 1807 Number of extensions: 7784 Number of successful extensions: 121 Number of sequences better than 1.0e-20: 1 length of query: 898 length of database: 10,358,551 effective HSP length: 16 effective length of query: 882 effective length of database: 10,329,639 effective search space: 9110741598 effective search space used: 9110741598 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)