BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZD02RM1.SCF screened BAC_end (994 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1244 1205 0.0 >3x_Contig1244 Length = 4689 Score = 1205 bits (608), Expect = 0.0 Identities = 682/703 (97%), Gaps = 3/703 (0%) Strand = Plus / Minus Query: 57 cttgtcaattgatacatatttgtttgctactaacggagatttggaacaattggtggaaga 116 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 cttgtcaattgatacatctgagtttgctactaacggagatttggaacaattggtggaaga 1142 Query: 117 attacaaggacaacttgattatcttgaggaaagatcaataagaagagtagcaaacaataa 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 attacaaggacaacttgattatcttgaggaaagatcaataagaagagtagcaaacaataa 1082 Query: 177 taaaagagacccagcagatgcgatcggtccattacctaacgctgacggttatttgccaat 236 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1081 taaaagagacccagcagatgcgatcggtccattacctaacgctgacggcgatttgccaat 1022 Query: 237 cgatcttaaaattcctttaccggaaacggtacaagagttcagcaatatcaaggatttgga 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 cgatcttaaaattcctttaccggaaacggtacaagagttcagcaatatcaaggatttgga 962 Query: 297 tttatgtaaggtagctgaattttatggcgtattgccattcccacaatctgatcttgaagc 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 tttatgtaaggtagctgaattttatggcgtattgccattcccacaatctgatcttgaagc 902 Query: 357 aatcactgagggcttgcgtaatgaagaggatgtttcaattcctacatttacagatgctac 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 aatcactgagggcttgcgtaatgaagaggatgtttcaattcctacatttacagatgctac 842 Query: 417 tgcggctgaccaactaaaaaaatacactaaagaagaaatggatgttatctttgacactgt 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 tgcggctgaccaactaaaaaaatacactaaagaagaaatggatgttatctttgacactgt 782 Query: 477 agcaagatatttanggttaaataatagaagaaccaaaggcacttggtaaacttttattga 536 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 agcaagatatttagggttaaataatagaagaaccaaaggcacttggtaaacttttattga 722 Query: 537 gaaaagataatgttataaaaaaacaaatgactggagtagagttataactatacatactat 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 gaaaagataatgttataaaaaaacaaatgactggagtagagttataactatacatactat 662 Query: 597 cgtctgtgtacgtgacttggttggttatatctatgtatatatatataatttacaactgat 656 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 661 cgtctgtgtacgtgacttggttgtttatatctatgtatatatatataatttacaactgat 602 Query: 657 tactttgatatgttgaaagacaggctttcatggataatttttttgggaacttgctttttt 716 ||||||||||||||||| ||| |||||||| ||| ||||||| ||||||||| | || Sbjct: 601 tactttgatatgttgaagtacatgctttcat-gattattttttctggaacttgc-tcttc 544 Query: 717 ttgaaagaaggtgaaacatcccgattggtggttattattagga 759 ||||||||||||||||||| |||| | || ||||||||||||| Sbjct: 543 ttgaaagaaggtgaaacat-ccgaattgttgttattattagga 502 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,638 Number of Sequences: 1807 Number of extensions: 18638 Number of successful extensions: 208 Number of sequences better than 1.0e-20: 1 length of query: 994 length of database: 10,358,551 effective HSP length: 16 effective length of query: 978 effective length of database: 10,329,639 effective search space: 10102386942 effective search space used: 10102386942 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)