BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZD05FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1531                                                        1576   0.0  

>3x_Contig1531 
          Length = 8774

 Score = 1576 bits (795), Expect = 0.0
 Identities = 831/839 (99%), Gaps = 3/839 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  tggaagttctaatattgcttccactatcgtcaataaaatatgcattagagtattctccaa 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tggaagttctaatattgcttccactatcgtcaataaaatatgcattagagtattctccaa 121

                                                                       
Query: 150 gtccagattgaagttttgccttttcgaatgctctgacatcgggcttacagactaagtcac 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtccagattgaagttttgccttttcgaatgctctgacatcgggcttacagactaagtcac 181

                                                                       
Query: 210 tttgcgagtaatcacagtaagttatcccatcaaatagatcagcaatacctaataaccgta 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tttgcgagtaatcacagtaagttatcccatcaaatagatcagcaatacctaataaccgta 241

                                                                       
Query: 270 cacaacgtagtccatgattcttatatgcatttgtgaaaagccacatcttgtcaaaacatc 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cacaacgtagtccatgattcttatatgcatttgtgaaaagccacatcttgtcaaaacatc 301

                                                                       
Query: 330 cactttctctgattcgttgcaatatctttctttgttcaggatccggtttcaaaatatctt 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cactttctctgattcgttgcaatatctttctttgttcaggatccggtttcaaaatatctt 361

                                                                       
Query: 390 gaaggggcaacgaatcgtccactaattcattatattcaacggcatcgatttcatgatgat 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaaggggcaacgaatcgtccactaattcattatattcaacggcatcgatttcatgatgat 421

                                                                       
Query: 450 caacgagacctttaattgctagtccgtaggttctgtagtaattttctcttagctccctgg 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 caacgagacctttaattgctagtccgtaggttctgtagtaattttctcttagctccctgg 481

                                                                       
Query: 510 cagtttcattatccaggttgaacttcatttgaaagtactgatgaatggactgttccatta 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cagtttcattatccaggttgaacttcatttgaaagtactgatgaatggactgttccatta 541

                                                                       
Query: 570 agtcatgaatccttaacgattttttataaaggcagttatctatatcaaagaagaacacct 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agtcatgaatccttaacgattttttataaaggcagttatctatatcaaagaagaacacct 601

                                                                       
Query: 630 tgagatttggatccggtttaggaataggttgatctggatcaaatgtaacctttgatccgg 689
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgagatttggatccggtttaggaataggttgatctggatcaaatgtaacctttgatccgg 661

                                                                       
Query: 690 gataagttaaagactccaaatgctgtctgttgatgcgcaatttatcctttgtttgtaatg 749
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gataagttaaagactccaaatgctgtctgttgatgcgcaatttatcctttgtttgtaatg 721

                                                                       
Query: 750 tgtattccgat-atgtagagtatgtcattctgaaaactcgatcttaccttctttgcattt 808
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 722 tgtattccgataatgtagagtatgtcattctgaaaactcgatctaaccttctttgcattt 781

                                                                       
Query: 809 ataatagaagttaatcaacagcaacagcaatgcccataacaatttccaaaaggacgtatg 868
           |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 782 ataatagaagttaatcaacagcaacagcaatgccaataacaatctccaagaggacgtatg 841

                                                                      
Query: 869 caaatcaacaagc-aaggttaatgccttgatt-aatctgcacaaagctgctcccctttt 925
           ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 842 caaatcaacaagcaaagtttaatgccttgattaaatctgcacaaagctgctcccctttt 900


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6851
Number of Sequences: 1807
Number of extensions: 6851
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)