BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZD05RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1505 0.0 >3x_Contig1486 Length = 12131 Score = 1505 bits (759), Expect = 0.0 Identities = 836/858 (97%), Gaps = 3/858 (0%) Strand = Plus / Minus Query: 51 tcttcttctcctgttcataaacactttgagtacaaatcaatgcactcttgatatctggga 110 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2957 tcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgatatctggga 2898 Query: 111 tttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgtgg 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2897 tttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatctgctgtgg 2838 Query: 171 cagtttttatgagttccttttatagtgcataagtaagatcaaatgttttttttgattcaa 230 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2837 cagtttttatgagttccttttatagtgcataagtaagatcaaatgttttggttgattcaa 2778 Query: 231 tatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaattc 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2777 tatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaacgaattc 2718 Query: 291 aacatggcactagtgactgacattaataaaggataactgcgatctgattatagttacact 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2717 aacatggcactagtgactgacattaataaaggataactgcgatctgattatagttacact 2658 Query: 351 aacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctctaaa 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2657 aacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccggctctaaa 2598 Query: 411 gtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcagaca 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2597 gtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatcatcagaca 2538 Query: 471 acagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcagaggc 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2537 acagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagatcagaggc 2478 Query: 531 tttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccgaaa 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2477 tttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtagatccgaaa 2418 Query: 591 agtggtaaagagagcgatgataaagcagtgtttcttgagagaattatgttgaaaggtgat 650 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2417 agtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaaaggtgat 2358 Query: 651 aatataacacttgttgnggcaaattgataatgcctactcagaaaatgataataggatgaa 710 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2357 aatataacacttgttgtggcaaattgataatgcctactcagaaaatgataataggatgaa 2298 Query: 711 agaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataagcct 770 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2297 agaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattatataagcct 2238 Query: 771 gtat-ttataacggaaaaatg-agcgcacttgaatttcgataacggcgacaagctctatc 828 |||| |||||||||||||||| | ||||| |||||||||||||||||||||| ||||| Sbjct: 2237 gtatattataacggaaaaatgaaaggcactgaaatttcgataacggcgacaagcactatc 2178 Query: 829 aaggcttattaagatttattgttcggaatctta-ggatctatttacattggggtgcttag 887 |||||| || ||||| ||||||||| ||||||| ||||||||||||| || | |||| || Sbjct: 2177 aaggctaataaagatatattgttcgtaatcttatggatctatttacaatgtgttgctcag 2118 Query: 888 attggggagaatccctta 905 |||||||||||| ||||| Sbjct: 2117 attggggagaatacctta 2100 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7811 Number of Sequences: 1807 Number of extensions: 7811 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)