BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZD11FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1318 1437 0.0 >3x_Contig1318 Length = 8566 Score = 1437 bits (725), Expect = 0.0 Identities = 829/855 (96%), Gaps = 7/855 (0%) Strand = Plus / Plus Query: 86 tcttcgcttaacctaatacggaaaagtaattgatcgaaccgaaagaaaaataaatatgaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2995 tcttcgcttaacctaatacggaaaagtaattgatcgaaccgaaagaaaaataaatatgaa 3054 Query: 146 acaacacttctcaacacgtgacccggaaggttaaaatgcggttttctttttgccttgagg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3055 acaacacttctcaacacgtgacccggaaggttaaaatgcggttttctttttgccttgagg 3114 Query: 206 gattcaatttattgttcgacgcgttgctcgaacaaccaactgcaccgaataaggaaagtc 265 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3115 gattcaatttaggtgacgacgcgttgctcgaacaaccaactgcaccgaataaggaaagtc 3174 Query: 266 aataagggtgcattgctttcgtggtttgttctgatcttagaaatcggagaaacttcgcta 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3175 aataagggtgcattgctttcgtggtttgttctgatcttagaaatcggagaaacttcgcta 3234 Query: 326 cacagaataaccgctgaaatgtaatgaaaaattcctgccaccttaccaaaagcggcaaaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3235 cacagaataaccgctgaaatgtaatgaaaaattcctgccaccttaccaaaagcggcaaaa 3294 Query: 386 ggccaagccaggataacttagctatctagcaaaatcaagcgtactgatttttcaagccgt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3295 ggccaagccaggataacttagctatctagcaaaatcaagcgtactgatttttcaagccgt 3354 Query: 446 tctttaatcggtcaaaaatgaaagatgcaaaaaatccggtattcagccatattggtgaag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3355 tctttaatcggtcaaaaatgaaagatgcaaaaaatccggtattcagccatattggtgaag 3414 Query: 506 aggggcaagaggagactgaatcccgactaaatttttctacgacttgaactgagtgaaacg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3415 aggggcaagaggagactgaatcccgactaaatttttctacgacttgaactgagtgaaacg 3474 Query: 566 gctaggaaaaacctcatgatcggtcaccagaccaacagctgttacaacaatataaaggtg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3475 gctaggaaaaacctcatgatcggtcaccagaccaacagctgttacaacaatataaaggtg 3534 Query: 626 gagagtaaatgtcacaagaatgttcttagaattactacagacgaatcactttgcctgtgc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3535 gagagtaaatgtcacaagaatgttcttagaattactacagacgaatcactttgcctgtgc 3594 Query: 686 tttcaaccgcactgcaaaaaatgttgaatgcattcatcacaattcaagccgccaaaatca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3595 tttcaaccgcactgcaaaaaatgttgaatgcattcatcacaattcaagccgccaaaatca 3654 Query: 746 ttgaaaaattatggaaagcattctagtcagaaaaatntttctttgattttggggattagg 805 |||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 3655 ttgaaaaattatgg-aagcattctagtcag-aaaatttttctttgatttt-gggattagg 3711 Query: 806 aaatcattgattgaaccattaggtaaaaaatttcaagtctgttatttatttgtccgggcc 865 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| | | Sbjct: 3712 aaatcattgattg-agcattaggtaaaaaatttcaagtctgttattcatttgtccgcg-c 3769 Query: 866 attatcagcttcctttcttctctcccaatgngttcctttatctgattcagcaatagaatc 925 || ||||||| ||| || ||||||||| || ||||| | ||||||||||||| |||| || Sbjct: 3770 atcatcagctccctctc-tctctcccagtgtgttcc-tgatctgattcagcactagactc 3827 Query: 926 acccggtttaacgcc 940 |||||| ||| |||| Sbjct: 3828 acccggcttagcgcc 3842 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6697 Number of Sequences: 1807 Number of extensions: 6697 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)