BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZD11FM1.SCF screened BAC_end
         (941 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1318                                                        1437   0.0  

>3x_Contig1318 
          Length = 8566

 Score = 1437 bits (725), Expect = 0.0
 Identities = 829/855 (96%), Gaps = 7/855 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   tcttcgcttaacctaatacggaaaagtaattgatcgaaccgaaagaaaaataaatatgaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2995 tcttcgcttaacctaatacggaaaagtaattgatcgaaccgaaagaaaaataaatatgaa 3054

                                                                        
Query: 146  acaacacttctcaacacgtgacccggaaggttaaaatgcggttttctttttgccttgagg 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3055 acaacacttctcaacacgtgacccggaaggttaaaatgcggttttctttttgccttgagg 3114

                                                                        
Query: 206  gattcaatttattgttcgacgcgttgctcgaacaaccaactgcaccgaataaggaaagtc 265
            |||||||||||     ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3115 gattcaatttaggtgacgacgcgttgctcgaacaaccaactgcaccgaataaggaaagtc 3174

                                                                        
Query: 266  aataagggtgcattgctttcgtggtttgttctgatcttagaaatcggagaaacttcgcta 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3175 aataagggtgcattgctttcgtggtttgttctgatcttagaaatcggagaaacttcgcta 3234

                                                                        
Query: 326  cacagaataaccgctgaaatgtaatgaaaaattcctgccaccttaccaaaagcggcaaaa 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3235 cacagaataaccgctgaaatgtaatgaaaaattcctgccaccttaccaaaagcggcaaaa 3294

                                                                        
Query: 386  ggccaagccaggataacttagctatctagcaaaatcaagcgtactgatttttcaagccgt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3295 ggccaagccaggataacttagctatctagcaaaatcaagcgtactgatttttcaagccgt 3354

                                                                        
Query: 446  tctttaatcggtcaaaaatgaaagatgcaaaaaatccggtattcagccatattggtgaag 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3355 tctttaatcggtcaaaaatgaaagatgcaaaaaatccggtattcagccatattggtgaag 3414

                                                                        
Query: 506  aggggcaagaggagactgaatcccgactaaatttttctacgacttgaactgagtgaaacg 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3415 aggggcaagaggagactgaatcccgactaaatttttctacgacttgaactgagtgaaacg 3474

                                                                        
Query: 566  gctaggaaaaacctcatgatcggtcaccagaccaacagctgttacaacaatataaaggtg 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3475 gctaggaaaaacctcatgatcggtcaccagaccaacagctgttacaacaatataaaggtg 3534

                                                                        
Query: 626  gagagtaaatgtcacaagaatgttcttagaattactacagacgaatcactttgcctgtgc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3535 gagagtaaatgtcacaagaatgttcttagaattactacagacgaatcactttgcctgtgc 3594

                                                                        
Query: 686  tttcaaccgcactgcaaaaaatgttgaatgcattcatcacaattcaagccgccaaaatca 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3595 tttcaaccgcactgcaaaaaatgttgaatgcattcatcacaattcaagccgccaaaatca 3654

                                                                        
Query: 746  ttgaaaaattatggaaagcattctagtcagaaaaatntttctttgattttggggattagg 805
            |||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 3655 ttgaaaaattatgg-aagcattctagtcag-aaaatttttctttgatttt-gggattagg 3711

                                                                        
Query: 806  aaatcattgattgaaccattaggtaaaaaatttcaagtctgttatttatttgtccgggcc 865
            ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 3712 aaatcattgattg-agcattaggtaaaaaatttcaagtctgttattcatttgtccgcg-c 3769

                                                                        
Query: 866  attatcagcttcctttcttctctcccaatgngttcctttatctgattcagcaatagaatc 925
            || ||||||| ||| || ||||||||| || ||||| | ||||||||||||| |||| ||
Sbjct: 3770 atcatcagctccctctc-tctctcccagtgtgttcc-tgatctgattcagcactagactc 3827

                           
Query: 926  acccggtttaacgcc 940
            |||||| ||| ||||
Sbjct: 3828 acccggcttagcgcc 3842


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6697
Number of Sequences: 1807
Number of extensions: 6697
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)