BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZE08FM1.SCF screened BAC_end
         (901 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig432                                                         1461   0.0  

>3x_Contig432 
          Length = 1594

 Score = 1461 bits (737), Expect = 0.0
 Identities = 796/808 (98%), Gaps = 7/808 (0%)
 Strand = Plus / Plus

                                                                       
Query: 87  ttaacatcaagaacagactctcgtatacccttcacataatctttgcacaatcgcagatat 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ttaacatcaagaacagactctcgtatacccttcacataatctttgcacaatcgcagatat 238

                                                                       
Query: 147 gccatcacatcagtccaaaaatcgagatacactatggcatgggggtattgggacaggtaa 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gccatcacatcagtccaaaaatcgagatacactatggcatgggggtattgggacaggtaa 298

                                                                       
Query: 207 gtatagaaggaccataaatccaaaggcgcagcggtttgttggtttaatacttcatataga 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtatagaaggaccataaatccaaaggcgcagcggtttgttggtttaatacttcatataga 358

                                                                       
Query: 267 gtgggtaagcgggctcgctgggaatttggcaatttttccatgactattgctcagcggttt 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtgggtaagcgggctcgctgggaatttggcaatttttccatgactattgctcagcggttt 418

                                                                       
Query: 327 gctaacactggaatggcttcaaagtgctgttaagatgtccggtatttcaataggagcagt 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctaacactggaatggcttcaaagtgctgttaagatgtccggtatttcaataggagcagt 478

                                                                       
Query: 387 ttctttgaatatactgtgacaacaacaactacggactggttgaaagagataaattatatt 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttctttgaatatactgtgacaacaacaactacggactggttgaaagagataaattatatt 538

                                                                       
Query: 447 tctcagataacgtgtaaggtgccacttgcctgttaattgaagtatttcgacgaccgttag 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tctcagataacgtgtaaggtgccacttgcctgttaattgaagtatttcgacgaccgttag 598

                                                                       
Query: 507 ctacacaaactgaccgttagcaattgagtaggaattggtgagttgtcaatatgtctttct 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctacacaaactgaccgttagcaattgagtaggaattggtgagttgtcaatatgtctttct 658

                                                                       
Query: 567 catctctgtattttagaatgagttgagtttcagtttcatgcttttttttttttgtaaggc 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 catctctgtattttagaatgagttgagtttcagtttcatgcttttttttttttgtaaggc 718

                                                                       
Query: 627 cagatcaagaa-ttttctcgattaggaaaaaccagcatgtaatttgcatcaacaatgggt 685
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cagatcaagaatttttctcgattaggaaaaaccagcatgtaatttgcatcaacaatgggt 778

                                                                       
Query: 686 ctaatagtttggaaaggatgggaaatcaattccaagtattcgatactcgagaattatatg 745
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ctaatagtttggaaaggatgggaaatcaattccaagtattcgatactcgagaattatatg 838

                                                                       
Query: 746 ggcaactttcttactaaaacaacttaaaaatatccataattatttactggccttccatct 805
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 839 ggcaactttcttactaaaacaacttaaaaatatccataattatttactgg-cttccatc- 896

                                                                       
Query: 806 tttcatcattagaagggcctttattacgtgactttcgaaacttcattataaaatccgata 865
           |||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||
Sbjct: 897 tttcatcattagaagggcctt--atacgtgactttcgaaacttcattataaaat-cgata 953

                                       
Query: 866 attatgggacttagaatacgttgattga 893
           | ||  |||| |||||| ||||||||||
Sbjct: 954 agtaatggacatagaat-cgttgattga 980


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,789
Number of Sequences: 1807
Number of extensions: 12789
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)