BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZE08FM1.SCF screened BAC_end (901 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig432 1461 0.0 >3x_Contig432 Length = 1594 Score = 1461 bits (737), Expect = 0.0 Identities = 796/808 (98%), Gaps = 7/808 (0%) Strand = Plus / Plus Query: 87 ttaacatcaagaacagactctcgtatacccttcacataatctttgcacaatcgcagatat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 ttaacatcaagaacagactctcgtatacccttcacataatctttgcacaatcgcagatat 238 Query: 147 gccatcacatcagtccaaaaatcgagatacactatggcatgggggtattgggacaggtaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 gccatcacatcagtccaaaaatcgagatacactatggcatgggggtattgggacaggtaa 298 Query: 207 gtatagaaggaccataaatccaaaggcgcagcggtttgttggtttaatacttcatataga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gtatagaaggaccataaatccaaaggcgcagcggtttgttggtttaatacttcatataga 358 Query: 267 gtgggtaagcgggctcgctgggaatttggcaatttttccatgactattgctcagcggttt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gtgggtaagcgggctcgctgggaatttggcaatttttccatgactattgctcagcggttt 418 Query: 327 gctaacactggaatggcttcaaagtgctgttaagatgtccggtatttcaataggagcagt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gctaacactggaatggcttcaaagtgctgttaagatgtccggtatttcaataggagcagt 478 Query: 387 ttctttgaatatactgtgacaacaacaactacggactggttgaaagagataaattatatt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ttctttgaatatactgtgacaacaacaactacggactggttgaaagagataaattatatt 538 Query: 447 tctcagataacgtgtaaggtgccacttgcctgttaattgaagtatttcgacgaccgttag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tctcagataacgtgtaaggtgccacttgcctgttaattgaagtatttcgacgaccgttag 598 Query: 507 ctacacaaactgaccgttagcaattgagtaggaattggtgagttgtcaatatgtctttct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 ctacacaaactgaccgttagcaattgagtaggaattggtgagttgtcaatatgtctttct 658 Query: 567 catctctgtattttagaatgagttgagtttcagtttcatgcttttttttttttgtaaggc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 catctctgtattttagaatgagttgagtttcagtttcatgcttttttttttttgtaaggc 718 Query: 627 cagatcaagaa-ttttctcgattaggaaaaaccagcatgtaatttgcatcaacaatgggt 685 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 cagatcaagaatttttctcgattaggaaaaaccagcatgtaatttgcatcaacaatgggt 778 Query: 686 ctaatagtttggaaaggatgggaaatcaattccaagtattcgatactcgagaattatatg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 ctaatagtttggaaaggatgggaaatcaattccaagtattcgatactcgagaattatatg 838 Query: 746 ggcaactttcttactaaaacaacttaaaaatatccataattatttactggccttccatct 805 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 839 ggcaactttcttactaaaacaacttaaaaatatccataattatttactgg-cttccatc- 896 Query: 806 tttcatcattagaagggcctttattacgtgactttcgaaacttcattataaaatccgata 865 ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 897 tttcatcattagaagggcctt--atacgtgactttcgaaacttcattataaaat-cgata 953 Query: 866 attatgggacttagaatacgttgattga 893 | || |||| |||||| |||||||||| Sbjct: 954 agtaatggacatagaat-cgttgattga 980 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,789 Number of Sequences: 1807 Number of extensions: 12789 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 901 length of database: 10,358,551 effective HSP length: 16 effective length of query: 885 effective length of database: 10,329,639 effective search space: 9141730515 effective search space used: 9141730515 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)