BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZE11FM1.SCF screened BAC_end
         (886 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1509                                                        1443   0.0  

>3x_Contig1509 
          Length = 8584

 Score = 1443 bits (728), Expect = 0.0
 Identities = 789/804 (98%), Gaps = 4/804 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   attcactcttcctttggagattgtcactaagttcaataattatgtgtaatcatcgtttaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7061 attcactcttcctttggagattgtcactaagttcaataattatgtgtaatcatcgtttaa 7120

                                                                        
Query: 146  tatgtagaaataaaatatctatacttcacttttttttcaagctcgctgtttgtcttcatt 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7121 tatgtagaaataaaatatctatacttcacttttttttcaagctcgctgtttgtcttcatt 7180

                                                                        
Query: 206  cgatattatctttgatgtgcaatatcgatttcaatgaactagagtcgattagctgtaaga 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7181 cgatattatctttgatgtgcaatatcgatttcaatgaactagagtcgattagctgtaaga 7240

                                                                        
Query: 266  gtttggatcgcttttcttctgttaaatcaggccaagttttcaaaattaattcgagatttt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7241 gtttggatcgcttttcttctgttaaatcaggccaagttttcaaaattaattcgagatttt 7300

                                                                        
Query: 326  gagccagttctttccattccatttggatctcatctcgccattgtctcagttccacaacgg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7301 gagccagttctttccattccatttggatctcatctcgccattgtctcagttccacaacgg 7360

                                                                        
Query: 386  ataacatggaattgatatcctggtaattaacatcagtatttgttgcacttcgtataagct 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7361 ataacatggaattgatatcctggtaattaacatcagtatttgttgcacttcgtataagct 7420

                                                                        
Query: 446  caatggctctgcatttttcgattagtcttgtccttaaagagtcatacttatgtaggagac 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7421 caatggctctgcatttttcgattagtcttgtccttaaagagtcatacttatgtaggagac 7480

                                                                        
Query: 506  tttgatccatttcattttcattatcgataagtctgaatctaggtaggttggctagatcac 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7481 tttgatccatttcattttcattatcgataagtctgaatctaggtaggttggctagatcac 7540

                                                                        
Query: 566  tgtgtaacttgggaaaactaactccatctccgttcaacatatttcccaaatctagacgtt 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7541 tgtgtaacttgggaaaactaactccatctccgttcaacatatttcccaaatctagacgtt 7600

                                                                        
Query: 626  gtaaatcaccgatatttgtcaagacatcatagtattcatttcgtttccaatcatctatat 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7601 gtaaatcaccgatatttgtcaagacatcatagtattcatttcgtttccaatcatctatat 7660

                                                                        
Query: 686  attcgactagctctttctt-tatatatcgtagttcacatcatacttcagtgcattgtcca 744
            |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 7661 attcgactagctctttcttcaatatatcgtagttcacatcatacttcagtgcattgtcca 7720

                                                                        
Query: 745  atcttgcttgttgttcatcatt-aaagaa-gaaaatttggtcttatgttttgccgtacca 802
            |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 7721 atcttgcttgttgttcatcattcaaagaaggaaattttggtcttatgttttgccgtacca 7780

                                                                        
Query: 803  gttggatgatctctgatttccgatccatactgtttgcaggttcttgtccaattaactggt 862
            |||| ||||||||||||| | |||||||||||||||||| |||||||||| || ||  ||
Sbjct: 7781 gttgaatgatctctgattccagatccatactgtttgcagtttcttgtccagtt-acgtgt 7839

                                    
Query: 863  atcgggctccgtttgtttgcttgt 886
            |||| |||||||||||||| ||||
Sbjct: 7840 atcgtgctccgtttgtttgtttgt 7863


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7164
Number of Sequences: 1807
Number of extensions: 7164
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)