BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZF02RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig330 1390 0.0 >3x_Contig330 Length = 1954 Score = 1390 bits (701), Expect = 0.0 Identities = 830/869 (95%), Gaps = 3/869 (0%) Strand = Plus / Minus Query: 51 ctttcaataaaagggtttatcttttcctagcaattgtgtttaaaactcttcaaaaatcag 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 ctttcaataaaagggtttatcttttcctagcaattgtgtttaaaactcttcaaaaatcag 1104 Query: 111 aagtgaacaagaatatggcataaagatactgtaatgaagatct-ctttaatgcaataaag 169 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1103 aagtgaacaagaatatggcataaagatactgtaatgaagatcttctttaatgcaataaag 1044 Query: 170 tgtttggaatgacaatcgatattggtagtattgagattatctatcatgtctatatttttt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1043 tgtttggaatgacaatcgatattggtagtattgagattatctatcatgtctataaattga 984 Query: 230 tatgatattgaatttacttttttccttttcattgttgtcaaatcaagattataaaatcca 289 ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 983 gatgatatggaatttacttttt-ccttttcattgttgtcaaatcaagattataaaatcca 925 Query: 290 atgtcaatttaaaatataaaatctatgaaggaaagcgatgacatagaagatgcataaatt 349 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 atgtcaattgaaaatataaaatctatgaaggaaagcgatgacatagaagatgcataaatt 865 Query: 350 atcaatgttagtcaaattttacataaaagcaatctcaaattaacaacgaatctaagcgac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 atcaatgttagtcaaattttacataaaagcaatctcaaattaacaacgaatctaagcgac 805 Query: 410 tgttcacttcatcgcgtttggtattatttgcctcttcctccaaaactccgtaaatgatgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 tgttcacttcatcgcgtttggtattatttgcctcttcctccaaaactccgtaaatgatgt 745 Query: 470 ctttgataatggtagcacctttttcatagtcactaggttcgttgaaaacctgaacagaaa 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ctttgataatggtagcacctttttcatagtcactaggttcgttgaaaacctgaacagaaa 685 Query: 530 atctaataaacaagtgactgttgttaatttggaatggcgcataacatttatactctgcga 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 atctaataaacaagtgactgttgttaatttggaatggcgcataacatttatactctgcga 625 Query: 590 gcatgatcttatcacatttactcttaaagtttaggaaataaattctatcagtactcatct 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 gcatgatcttatcacatttactcttaaagtttaggaaataaattctatcagtactcatct 565 Query: 650 tttcaatgagatgttgacattccgatttaatcggtaattctatacagaataatccgggtg 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 tttcaatgagatgttgacattccgatttaatcggtaattctatacagaataatccgggtg 505 Query: 710 aacgtaaagaa-tagtcgagttttcaagtagaacagatccttggccaaaaacctccaaaa 768 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 aacgtaaagaattagtcgagttttcaagtagaacagatccttggccaaaaacctccaaaa 445 Query: 769 tttttggaataccagctttttgcaaattccattgattttctcgaattttttctttcacgc 828 | ||||||||| |||||| |||||||| |||||||| ||||||||| ||||||| ||| Sbjct: 444 tctttggaatagcagcttcttgcaaatcccattgatattctcgaatcttttcttcaccgc 385 Query: 829 cgaattttttcttacggtatttcaagtgttccttcacagcaaatttggacaatttccaaa 888 || || | | ||||||| ||||||| ||||| ||||||||| | |||| | | | ||| Sbjct: 384 cgcatatgtccttacggaatttcaatgcttcctccacagcaaaataggacgagtacgaaa 325 Query: 889 cggggccgtttaagccatatttgttaaca 917 ||| |||| | ||| || ||||||||||| Sbjct: 324 cggtgccgataaaggcaaatttgttaaca 296 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9607 Number of Sequences: 1807 Number of extensions: 9607 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)