BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZF07RM1.SCF screened BAC_end (1084 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1453 591 e-168 >3x_Contig1453 Length = 8444 Score = 591 bits (298), Expect = e-168 Identities = 370/390 (94%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 64 tctcaatgattgcgtaaattgtttgggt-catccaaaattcataacc-taatattgacgg 121 |||||||||||| |||||||||||| | |||||||||||||| |||||||||||| Sbjct: 2522 tctcaatgattgtgtaaattgtttgttttcatccaaaattcatgttgataatattgacgg 2463 Query: 122 ccaaaatagtaatcatgaaaataattctgaaaaactatcaacgaaaggtgtcagcgaacg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2462 ccaaaatagtaatcatgaaaataattctgaaaaactatcaacgaaaggtgtcagcgaacg 2403 Query: 182 ataagaataagtcacgtgcgcaagttttacaattgtaatctatttagacgtttttttgta 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 2402 ataagaataagtcacgtgcgcaagttttacaattgtaatctatttagacgtgagtatgta 2343 Query: 242 ttgtcgttagatgatatttcgaggtaggatgttcttcaaggtaaattcttcagacaccgg 301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2342 ttgtcgttagatgagatttcgaggtaggatgttcttcaaggtaaattcttcagacaccgg 2283 Query: 302 ttcatccaatatggcaaggtctttgtctgggaagattttggggaaaaacaatgataaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2282 ttcatccaatatggcaaggtctttgtctgggaagattttggggaaaaacaatgataaaat 2223 Query: 362 gacggtgagtaacagcacgataggaaaaccaatcgcaccttatggtgtttgttattgcga 421 |||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 2222 gacggtgagtaacaacacgataggaaaaccaatcgcacctt-ttgtgtttgttattgcga 2164 Query: 422 attcaacagcgaatccgactaaactgagtg 451 ||||| || ||||||| ||||||||||||| Sbjct: 2163 attcagcaacgaatccaactaaactgagtg 2134 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7823 Number of Sequences: 1807 Number of extensions: 7823 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 1084 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1068 effective length of database: 10,329,639 effective search space: 11032054452 effective search space used: 11032054452 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)