BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZG04FM1.SCF screened BAC_end
         (929 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1354                                                        1439   0.0  

>3x_Contig1354 
          Length = 7778

 Score = 1439 bits (726), Expect = 0.0
 Identities = 781/794 (98%), Gaps = 4/794 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   cttgagtttttccgaacaaagggttgtaaaagcagagaagttggaaacacagtcgaagat 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6699 cttgagtttttccgaacaaagggttgtaaaagcagagaagttggaaacacagtcgaagat 6758

                                                                        
Query: 148  gtagggaaacagcgtaacatcattggtcgaagaccggttcctgtgggaacatggtgcggc 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6759 gtagggaaacagcgtaacatcattggtcgaagaccggttcctgtgggaacatggtgcggc 6818

                                                                        
Query: 208  tgcgtgtttgccacaaaaacgaaaaaagaaccaaaaaaaaacgttaaacgctaatatcgt 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6819 tgcgtgtttgccacaaaaacgaaaaaagaaccaaaaaaaaacgttaaacgctaatatcgt 6878

                                                                        
Query: 268  tcgtttggtaaaaaaaaggaatcgccgaatcttgaattccaggatttctatgaaatcctg 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6879 tcgtttggtaaaaaaaaggaatcgccgaatcttgaattccaggatttctatgaaatcctg 6938

                                                                        
Query: 328  gaattctttactgctttcatactcgaatttcgtctggttcgttgtttttgatttttcatt 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6939 gaattctttactgctttcatactcgaatttcgtctggttcgttgtttttgatttttcatt 6998

                                                                        
Query: 388  attattcatagagattcagtatagtgcaaactgagttcagcatgtagagaaagaaggtcg 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6999 attattcatagagattcagtatagtgcaaactgagttcagcatgtagagaaagaaggtcg 7058

                                                                        
Query: 448  acatccgatatgtcaggttatgcaagtgttaatgaaacgcctcatcttgaagacgaggta 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7059 acatccgatatgtcaggttatgcaagtgttaatgaaacgcctcatcttgaagacgaggta 7118

                                                                        
Query: 508  gatggccatttcggatggctggatgcgattcgggtgttgtttggtgtcctgttagcctca 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7119 gatggccatttcggatggctggatgcgattcgggtgttgtttggtgtcctgttagcctca 7178

                                                                        
Query: 568  caactaactgtgaaatgtgtgtcgggatactggtggcttccaacttttgattggtggtcc 627
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 7179 caactaactgtgaaatgtgtgtcgggatactggtggctt-caacttttgattggtggtcc 7237

                                                                        
Query: 628  cgagttggcacagcgggtatagggttaggct-actggtctacacacaattatactatccc 686
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7238 cgagttggcacagcgggtatagggttaggctaactggtctacacacaattatactatccc 7297

                                                                        
Query: 687  gtataacttcactttacaggagttgagtcggttctcaggtgattacagttagtcaaacga 746
            ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 7298 gtataacttcactttacaggagttgagtcggttctcaggtgataacagtaagtcaaacga 7357

                                                                        
Query: 747  ccaaccaatctttatagcaatcaataggaccgtgtttgacgtttcttcgtctccccggtt 806
            ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7358 ccaaccaatcttattagcaatcaataggaccgtgtttgacgtttcttcgtctccccggtt 7417

                                                                        
Query: 807  ctatggtgctttgggtgcctattaagaagtttacaggcacggatggtgccaacaattttc 866
            ||||||||||| |||||| || |||||||||||||||||||||| || ||||||| ||||
Sbjct: 7418 ctatggtgcttggggtgctta-taagaagtttacaggcacggattgttccaacaa-tttc 7475

                          
Query: 867  catttcggaatatt 880
            || |||||||||||
Sbjct: 7476 cagttcggaatatt 7489


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6068
Number of Sequences: 1807
Number of extensions: 6068
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)