BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZG04FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1354 1439 0.0 >3x_Contig1354 Length = 7778 Score = 1439 bits (726), Expect = 0.0 Identities = 781/794 (98%), Gaps = 4/794 (0%) Strand = Plus / Plus Query: 88 cttgagtttttccgaacaaagggttgtaaaagcagagaagttggaaacacagtcgaagat 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6699 cttgagtttttccgaacaaagggttgtaaaagcagagaagttggaaacacagtcgaagat 6758 Query: 148 gtagggaaacagcgtaacatcattggtcgaagaccggttcctgtgggaacatggtgcggc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6759 gtagggaaacagcgtaacatcattggtcgaagaccggttcctgtgggaacatggtgcggc 6818 Query: 208 tgcgtgtttgccacaaaaacgaaaaaagaaccaaaaaaaaacgttaaacgctaatatcgt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6819 tgcgtgtttgccacaaaaacgaaaaaagaaccaaaaaaaaacgttaaacgctaatatcgt 6878 Query: 268 tcgtttggtaaaaaaaaggaatcgccgaatcttgaattccaggatttctatgaaatcctg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6879 tcgtttggtaaaaaaaaggaatcgccgaatcttgaattccaggatttctatgaaatcctg 6938 Query: 328 gaattctttactgctttcatactcgaatttcgtctggttcgttgtttttgatttttcatt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6939 gaattctttactgctttcatactcgaatttcgtctggttcgttgtttttgatttttcatt 6998 Query: 388 attattcatagagattcagtatagtgcaaactgagttcagcatgtagagaaagaaggtcg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6999 attattcatagagattcagtatagtgcaaactgagttcagcatgtagagaaagaaggtcg 7058 Query: 448 acatccgatatgtcaggttatgcaagtgttaatgaaacgcctcatcttgaagacgaggta 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7059 acatccgatatgtcaggttatgcaagtgttaatgaaacgcctcatcttgaagacgaggta 7118 Query: 508 gatggccatttcggatggctggatgcgattcgggtgttgtttggtgtcctgttagcctca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7119 gatggccatttcggatggctggatgcgattcgggtgttgtttggtgtcctgttagcctca 7178 Query: 568 caactaactgtgaaatgtgtgtcgggatactggtggcttccaacttttgattggtggtcc 627 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 7179 caactaactgtgaaatgtgtgtcgggatactggtggctt-caacttttgattggtggtcc 7237 Query: 628 cgagttggcacagcgggtatagggttaggct-actggtctacacacaattatactatccc 686 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 7238 cgagttggcacagcgggtatagggttaggctaactggtctacacacaattatactatccc 7297 Query: 687 gtataacttcactttacaggagttgagtcggttctcaggtgattacagttagtcaaacga 746 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 7298 gtataacttcactttacaggagttgagtcggttctcaggtgataacagtaagtcaaacga 7357 Query: 747 ccaaccaatctttatagcaatcaataggaccgtgtttgacgtttcttcgtctccccggtt 806 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7358 ccaaccaatcttattagcaatcaataggaccgtgtttgacgtttcttcgtctccccggtt 7417 Query: 807 ctatggtgctttgggtgcctattaagaagtttacaggcacggatggtgccaacaattttc 866 ||||||||||| |||||| || |||||||||||||||||||||| || ||||||| |||| Sbjct: 7418 ctatggtgcttggggtgctta-taagaagtttacaggcacggattgttccaacaa-tttc 7475 Query: 867 catttcggaatatt 880 || ||||||||||| Sbjct: 7476 cagttcggaatatt 7489 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6068 Number of Sequences: 1807 Number of extensions: 6068 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)