BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZG08FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig357 131 3e-30 >3x_Contig357 Length = 1454 Score = 131 bits (66), Expect = 3e-30 Identities = 66/66 (100%) Strand = Plus / Plus Query: 87 caagtttaacacagtaagtgccaatttatgtgtctttagaaattacctcctttctgaatt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 caagtttaacacagtaagtgccaatttatgtgtctttagaaattacctcctttctgaatt 1438 Query: 147 agtggg 152 |||||| Sbjct: 1439 agtggg 1444 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6447 Number of Sequences: 1807 Number of extensions: 6447 Number of successful extensions: 22 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)