BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZG09FM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1354 0.0 >3x_Contig1610 Length = 13981 Score = 1354 bits (683), Expect = 0.0 Identities = 736/750 (98%), Gaps = 3/750 (0%) Strand = Plus / Minus Query: 87 ctcttgattttgtgcattaggtatttatatgttttttctcactgaaaacaacttcctcca 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2449 ctcttgattttgtgcattaggtatttatatgttttttctcactgaaaacaacttcctcca 2390 Query: 147 gtttttgcttacatggcacgaaacttttcataatgaacggcattagtattcaggtaagat 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2389 gtttttgcttacatggcacgaaacttttcataatgaacggcattagtattcaggtaagat 2330 Query: 207 ctaacagctgatgcgttttttgctccaacagcaaacagaaaggacctagaagcgtctatt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctaacagctgatgcgttttttgctccaacagcaaacagaaaggacctagaagcgtctatt 2270 Query: 267 taactcgactagctttcttatcaaactgtcttcatttattgtcaaacccaaatgatttat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2269 taactcgactagctttcttatcaaactgtcttcatttattgtcaaacccaaatgatttat 2210 Query: 327 tttgggcagattgaaacttcattggtcaaaacagctatagagcattgagtgaaacctcta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2209 tttgggcagattgaaacttcattggtcaaaacagctatagagcattgagtgaaacctcta 2150 Query: 387 ctcgtaccttcgatgagccagttgggtttcaatatctagtcacgtgtgtttacttaaact 446 |||| | | |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2149 ctcgaaacatcgatgagccagttgggtttcaatatctagtcacgtgtgtgtacttaaact 2090 Query: 447 ctcttcgcttttttgtctatgtccactaccctgatttcggatttggctggtgctttcctt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2089 ctcttcgcttttttgtctatgtccactaccctgatttcggatttggctggtgctttcctt 2030 Query: 507 tttttctctgaaaccagaattacatattttaaaatcaatacaaatttaaatcaccactga 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2029 tttttctctgaaaccagaattacatattttaaaatcaatacaaatttaaatcaccactga 1970 Query: 567 ggccgttgataacaaccttgatccaaactgatctctgttcctttatcatcaaaatattcg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 ggccgttgataacaaccttgatccaaactgatctctgttcctttatcatcaaaatattcg 1910 Query: 627 gatacgttcgtagaataacttaatttcgataaaaaggagtgtgtgacactagttgaaact 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1909 gatacgttcgtagaataacttaatttcgataaaaaggagtgtgtgacactagttgaaact 1850 Query: 687 ctttttttttttttacgcatttgttattgactgagcttttcattatttcatcttttgagt 746 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1849 ctctttttttttttacgcatttgttattgactgagcttttcattatttcatcttttgagt 1790 Query: 747 actggtttaagaaggtaccacgcagcttgaagcaaaatataaacgatgtcacatttgaaa 806 ||||| ||||||||||||||||||||| | |||||||||||||||||||||| |||||| Sbjct: 1789 actgg-ttaagaaggtaccacgcagctgaaggcaaaatataaacgatgtcacagttgaaa 1731 Query: 807 ccttttcccattcttatggacagnataaca 836 || ||||||| ||||||||||| |||||| Sbjct: 1730 cc-tttccca-tcttatggacaagataaca 1703 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,536 Number of Sequences: 1807 Number of extensions: 14536 Number of successful extensions: 176 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)