BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC23ZG11RM1.SCF screened BAC_end
         (919 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1776                                                        1316   0.0  

>3x_Contig1776 
          Length = 26138

 Score = 1316 bits (664), Expect = 0.0
 Identities = 789/820 (96%), Gaps = 8/820 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    tgagtcaagaacctcaacttttataccctagaaatctcacagagacgacaactaaaatca 107
             |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 23905 tgagtcaagaacctcaactcagataccctagaaatctcacagagacgacaactaaaatca 23964

                                                                         
Query: 108   agctcaattggaaaataaaacaagcaagtaaaaaacaaacaagcacttgacactgtttaa 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23965 agctcaattggaaaataaaacaagcaagtaaaaaacaaacaagcacttgacactgtttaa 24024

                                                                         
Query: 168   gggtttgcttccttttaaaaaacattcctagcaacgtccctgtttcagatttatgttgaa 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24025 gggtttgcttccttttaaaaaacattcctagcaacgtccctgtttcagatttaggttgaa 24084

                                                                         
Query: 228   gtcgctctgcaggtaattactgcaccacaatatgttaacggtggctgcaagatcgattgc 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24085 gtcgctctgcaggtaattactgcaccacaatatgttaacggtggctgcaagatcgattgc 24144

                                                                         
Query: 288   tatgtacaacggagagctgtctccatctggaggtcaagtcacgtgagaaacaaggatgtt 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24145 tatgtacaacggagagctgtctccatctggaggtcaagtcacgtgagaaacaaggatgtt 24204

                                                                         
Query: 348   tgtcgcacattcgggtaatgaaatgtcatctcccgtggatatcaatttcattctgaaact 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24205 tgtcgcacattcgggtaatgaaatgtcatctcccgtggatatcaatttcattctgaaact 24264

                                                                         
Query: 408   tcatcaatttgatatcaattgaaaagaaatgaatgaaatggaaaagtatgcagaacatgc 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24265 tcatcaatttgatatcaattgaaaagaaatgaatgaaatggaaaagtatgcagaacatgc 24324

                                                                         
Query: 468   gaatacaggaaagcttattcatgcgcatttcatcaggataggcttgaacgcaatagttcg 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24325 gaatacaggaaagcttattcatgcgcatttcatcaggataggcttgaacgcaatagttcg 24384

                                                                         
Query: 528   aaatatagaagcaacatcgttggcggcttaaaggggattcgcgactgtttagaagctaac 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24385 aaatatagaagcaacatcgttggcggcttaaaggggattcgcgactgtttagaagctaac 24444

                                                                         
Query: 588   tgtggagtgcaaaagaatgccagaacagcctaagtgtcctgtggatgactccacgaagga 647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24445 tgtggagtgcaaaagaatgccagaacagcctaagtgtcctgtggatgactccacgaagga 24504

                                                                         
Query: 648   agtgtggttgaaacaacagagctctaattataagaatgaatccgcaaaagcactacctcc 707
             |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 24505 agtgtggttgaaacaacagagcactaataataagaatgaatcagcaaaagcactacctcc 24564

                                                                         
Query: 708   aaatcatccaccggctagtttttgaagggtcaagatttttgtccgggtagaccatttctt 767
             |||||||||||||||||| || |||||||||| ||  ||||||| ||||||||| |||||
Sbjct: 24565 aaatcatccaccggctag-ttctgaagggtcagga-gtttgtcc-ggtagacca-ttctt 24620

                                                                         
Query: 768   cccaagaatgttatgcctgaaaaaacattttacagaccgttaatggctctttttgccgtg 827
             ||| || ||| |||| |||||||| || | ||||||||||||||||||||  | || |||
Sbjct: 24621 ccc-aggatg-tatggctgaaaaacca-tctacagaccgttaatggctctgctggcggtg 24677

                                                     
Query: 828   cctgcatttgcagcatccccagcaccaattatttcgatca 867
              ||||| |||||||| | ||||||||||| || |||||||
Sbjct: 24678 -ctgcagttgcagcagcaccagcaccaatcatatcgatca 24716


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6697
Number of Sequences: 1807
Number of extensions: 6697
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)