BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC23ZH02FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig652 969 0.0 >3x_Contig652 Length = 2532 Score = 969 bits (489), Expect = 0.0 Identities = 510/513 (99%), Gaps = 3/513 (0%) Strand = Plus / Minus Query: 86 atctaagagctttgtagctaaacttaacgatccagtttcagcaaaagctgatacgacgac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 atctaagagctttgtagctaaacttaacgatccagtttcagcaaaagctgatacgacgac 478 Query: 146 agagtacacttcatattggtgttcaaccaattgcatatttttcagaagttctgatctaaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 agagtacacttcatattggtgttcaaccaattgcatatttttcagaagttctgatctaaa 418 Query: 206 atcttgataaaggtcttttactgcctcatgttcgttcaacatcttggcgtacgagattaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 atcttgataaaggtcttttactgcctcatgttcgttcaacatcttggcgtacgagattaa 358 Query: 266 agaaatgtaatagatttcattctttgaatacttcacgtttgaatcaatgaaattcttgat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agaaatgtaatagatttcattctttgaatacttcacgtttgaatcaatgaaattcttgat 298 Query: 326 atagccgtactttatgtggccagggtataaattgatagccaacaaaagattatctaaaaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 atagccgtactttatgtggccagggtataaattgatagccaacaaaagattatctaaaaa 238 Query: 386 ctcatggtcgaaggacttattcttattcaaattagaagcaaagaacagatcaatggcaat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ctcatggtcgaaggacttattcttattcaaattagaagcaaagaacagatcaatggcaat 178 Query: 446 tttgaaaaaatctaatccattggtgttgtgtaactcaaacgctctgattgatccagacaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 tttgaaaaaatctaatccattggtgttgtgtaactcaaacgctctgattgatccagacaa 118 Query: 506 caatgaacctacaacaaggtgatagatttctgcgcttggttttaatttattctgaattat 565 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 117 caatgaacctacaacaaggtgatagatttct-cgctt-gttttaatttattctgaattat 60 Query: 566 atcttggtaacagttaagtaattcaaacatttg 598 ||||| ||||||||||||||||||||||||||| Sbjct: 59 atctt-gtaacagttaagtaattcaaacatttg 28 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8022 Number of Sequences: 1807 Number of extensions: 8022 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)