BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC24ZA08RM1.SCF screened BAC_end
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1790 1556 0.0
3x_Contig1124 1524 0.0
3x_Contig1805 1501 0.0
3x_Contig1773 1501 0.0
3x_Contig1213 1421 0.0
>3x_Contig1790
Length = 27369
Score = 1556 bits (785), Expect = 0.0
Identities = 870/892 (97%), Gaps = 5/892 (0%)
Strand = Plus / Plus
Query: 48 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 2662
Query: 108 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 2722
Query: 168 tcacatggtaaatattattcactaataactctaacctcgaatttaataccttttgctttc 227
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2723 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 2782
Query: 228 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 2842
Query: 288 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 2902
Query: 348 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 2962
Query: 408 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2963 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 3022
Query: 468 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3023 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 3082
Query: 528 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3083 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 3142
Query: 588 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3143 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 3202
Query: 648 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3203 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 3262
Query: 708 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3263 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 3322
Query: 768 aacggaaatttcgaatggaactagcaagttataaacatttccaggctgaccatcgtaatt 827
|||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 3323 aacggaaattcggaatggaactagcaagtaataaaca-ttccaagctgaccatcgtaatt 3381
Query: 828 gtgctattgaacttatttggttgcttgaatcanaaactttcagc-attaataattggtgg 886
||||||||| |||||||||||||||||||||| ||||||||||| || ||||||| || |
Sbjct: 3382 gtgctattggacttatttggttgcttgaatcagaaactttcagcaataaataatt-gttg 3440
Query: 887 ctgaaagagttt-agcttcaaagtggattaattttggcatttttatatctac 937
||| |||||||| |||||||| || ||| || |||||||||||||||||||
Sbjct: 3441 ctggaagagtttaagcttcaagttgtatt-atcttggcatttttatatctac 3491
>3x_Contig1124
Length = 2635
Score = 1524 bits (769), Expect = 0.0
Identities = 866/892 (97%), Gaps = 5/892 (0%)
Strand = Plus / Plus
Query: 48 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 843
Query: 108 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 903
Query: 168 tcacatggtaaatattattcactaataactctaacctcgaatttaataccttttgctttc 227
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 904 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 963
Query: 228 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 1023
Query: 288 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 1083
Query: 348 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 1143
Query: 408 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 1203
Query: 468 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 1263
Query: 528 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 1323
Query: 588 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 1383
Query: 648 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 707
||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1384 attcccaactgtagaatgacccgttttcgaagtatgcactcacattcaaaaagtacccac 1443
Query: 708 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 1503
Query: 768 aacggaaatttcgaatggaactagcaagttataaacatttccaggctgaccatcgtaatt 827
|||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 1504 aacggaaattcggaatggaactagcaagtaataaaca-ttccaagctgaccatcgtaatt 1562
Query: 828 gtgctattgaacttatttggttgcttgaatcanaaactttcagc-attaataattggtgg 886
||||||||| |||||||||||||||||||||| ||||||||||| || ||||||| || |
Sbjct: 1563 gtgctattggacttatttggttgcttgaatcagaaactttcagcaataaataatt-gttg 1621
Query: 887 ctgaaagagttt-agcttcaaagtggattaattttggcatttttatatctac 937
||| |||||||| |||||||| || ||| || |||||||||||||||||||
Sbjct: 1622 ctggaagagtttaagcttcaagttgtatt-atcttggcatttttatatctac 1672
>3x_Contig1805
Length = 19369
Score = 1501 bits (757), Expect = 0.0
Identities = 863/892 (96%), Gaps = 5/892 (0%)
Strand = Plus / Minus
Query: 48 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 107
||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 19282 ataaactgaggatactttgtaccctctcccattcgatgttgataacctatacgttattga 19223
Query: 108 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19222 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 19163
Query: 168 tcacatggtaaatattattcactaataactctaacctcgaatttaataccttttgctttc 227
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 19162 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 19103
Query: 228 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19102 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 19043
Query: 288 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19042 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 18983
Query: 348 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18982 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 18923
Query: 408 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18922 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 18863
Query: 468 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18862 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 18803
Query: 528 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18802 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 18743
Query: 588 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18742 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 18683
Query: 648 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18682 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 18623
Query: 708 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18622 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 18563
Query: 768 aacggaaatttcgaatggaactagcaagttataaacatttccaggctgaccatcgtaatt 827
|||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||| ||
Sbjct: 18562 aacggaaattcggaatggaactagcaagcaataaacattccca-gctgaccatcgtattt 18504
Query: 828 gtgctattgaacttatttggttgcttgaatcanaaactttcagc-attaataattggtgg 886
||||||| | |||||||||||||||||||||| ||||||||||| || ||||||| || |
Sbjct: 18503 gtgctatcggacttatttggttgcttgaatcagaaactttcagcaataaataatt-gttg 18445
Query: 887 ctgaaagagttt-agcttcaaagtggattaattttggcatttttatatctac 937
||| |||||||| |||||||| || ||| || ||||||||| |||||||||
Sbjct: 18444 ctggaagagtttaagcttcaagttgtatt-atcttggcatttctatatctac 18394
>3x_Contig1773
Length = 8694
Score = 1501 bits (757), Expect = 0.0
Identities = 863/892 (96%), Gaps = 5/892 (0%)
Strand = Plus / Plus
Query: 48 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6167 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 6226
Query: 108 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6227 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 6286
Query: 168 tcacatggtaaatattattcactaataactctaacctcgaatttaataccttttgctttc 227
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6287 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 6346
Query: 228 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6347 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 6406
Query: 288 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 347
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 6407 cctttcttaagagagtagaaaaattgtcagataactgccaaatgctaaggccccataata 6466
Query: 348 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6467 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 6526
Query: 408 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 467
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6527 ctcgacatctcttgttactgccccggcaatgatctgttttactgcagaattgcccacagt 6586
Query: 468 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6587 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 6646
Query: 528 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6647 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 6706
Query: 588 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6707 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 6766
Query: 648 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 707
||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 6767 attcccaactgtagaatgacccgttttcgaagtatgcactcacattcaaaaagtacccac 6826
Query: 708 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6827 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 6886
Query: 768 aacggaaatttcgaatggaactagcaagttataaacatttccaggctgaccatcgtaatt 827
|||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 6887 aacggaaattcggaatggaactagcaagtaataaaca-ttccaagctgaccatcgtaatt 6945
Query: 828 gtgctattgaacttatttggttgcttgaatcanaaactttcagc-attaataattggtgg 886
||||||||| |||||||||||||||||||||| ||||||||||| || ||||||| || |
Sbjct: 6946 gtgctattggacttatttggttgcttgaatcagaaactttcagcaataaataatt-gttg 7004
Query: 887 ctgaaagagttt-agcttcaaagtggattaattttggcatttttatatctac 937
||| |||||||| |||||||| || ||| || |||||||||||||||||||
Sbjct: 7005 ctggaagagtttaagcttcaagttgtatt-atcttggcatttttatatctac 7055
>3x_Contig1213
Length = 3226
Score = 1421 bits (717), Expect = 0.0
Identities = 853/892 (95%), Gaps = 5/892 (0%)
Strand = Plus / Minus
Query: 48 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2533 ataaactgaggattctttgtcccctctcccattcgatgttgataacctattcgttattga 2474
Query: 108 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2473 tctacattaaccaatgtgccaaatagaagaaaccaaagaaaacgtcgaagaagcatcgaa 2414
Query: 168 tcacatggtaaatattattcactaataactctaacctcgaatttaataccttttgctttc 227
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2413 tcacatggtaaatattattcactaataactctaacctcgaatttaatacccggagctttc 2354
Query: 228 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2353 catcattgcctaaacacaaagctgaaatgacaggcatcagattttgttctatcaacgaat 2294
Query: 288 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2293 cctttcttaagagagtagaaacattgtcggataactgccaaatgctaaggccccataata 2234
Query: 348 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacggcatc 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2233 ccaattacaaaacgcaatgcttttgccacaaaccgattgcccattgcagaatacgacatc 2174
Query: 408 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgcccacagt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2173 ctcgacatctcttgttactgccccggcaatgatctgttttaccgcagaattgctcacagt 2114
Query: 468 tgttgatcgctctttgtttcaaaccacttggagtagctactaatgtgtggggctcggcta 527
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2113 tgttgatcgctctttgtttcaaaccacttggagtagttactaatgtgtggggctcggcta 2054
Query: 528 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgctttcaataaaattag 587
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 2053 tggtttctgtaaaggaaccatttacactagcttgtacctcctcgtattcaataaaatcag 1994
Query: 588 ctacattaaagtgttagtgactagcgaaaaagtctgaagttgcagcaactgttgcgaacg 647
||||||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1993 ctacattaaagagttcgtgactagcgaaaaggtttgaagttgcagcaactgttgcgaacg 1934
Query: 648 attcccaacggtaaaatgacccgttttcaaagtacgcactcacattcaaaaagtacccac 707
|||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 1933 attcccaacggtaaaatgacccgttttcgaagtatgcagtcacattcaaaaagtacccac 1874
Query: 708 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1873 tactgttgtcggcggatgagataacggtgaatgtatcgccagctaaactttgatcgaaca 1814
Query: 768 aacggaaatttcgaatggaactagcaagttataaacatttccaggctgaccatcgtaatt 827
|||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||| ||
Sbjct: 1813 aacggaaattcggaatggaactagcaagcaataaaca-ttccaagctgaccatcgtattt 1755
Query: 828 gtgctattgaacttatttggttgcttgaatcanaaactttcagc-attaataattggtgg 886
||||||| | |||||||||||||||||||||| ||||||||||| || ||||||| || |
Sbjct: 1754 gtgctatcggacttatttggttgcttgaatcagaaactttcagcaataaataatt-gttg 1696
Query: 887 ctgaaagagttt-agcttcaaagtggattaattttggcatttttatatctac 937
||| |||||||| |||||||| || ||| || ||||||||| |||||||||
Sbjct: 1695 ctggaagagtttaagcttcaagttgtatt-atcttggcatttctatatctac 1645
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5971
Number of Sequences: 1807
Number of extensions: 5971
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 5
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)