BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZA12FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig829 1550 0.0 >3x_Contig829 Length = 2277 Score = 1550 bits (782), Expect = 0.0 Identities = 814/825 (98%) Strand = Plus / Plus Query: 86 ctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttataaaaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 ctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttataaaaa 855 Query: 146 aggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcgacagt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 aggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcgacagt 915 Query: 206 atacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcaaaactg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 atacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcaaaactg 975 Query: 266 acgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctgaaat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 acgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctgaaat 1035 Query: 326 cttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcgatata 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 cttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcgatata 1095 Query: 386 ttgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaaactc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1096 ttgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaaactc 1155 Query: 446 tctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcagtttg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1156 tctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcagtttg 1215 Query: 506 atggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggttttttgg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1216 atggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggttttttgg 1275 Query: 566 ctgaaaatgattctgttgaaccttctcttgaaaatgacaaggacatgcagacagaaaact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1276 ctgaaaatgattctgttgaaccttctcttgaaaatgacaaggacatgcagacagaaaact 1335 Query: 626 tgtctaatacgatcaattcatctgacactacgaagaaattcttagcttgggaatataagg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1336 tgtctaatacgatcaattcatctgacactacgaagaaattcttagcttgggaatataagg 1395 Query: 686 atgataaatttgttaaagtaccgtgtacccctccaaatgaagataacgttgaatgggaca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1396 atgataaatttgttaaagtaccgtgtacccctccaaatgaagataacgttgaatgggaca 1455 Query: 746 ttgatcactgtcattactacaaacaattctcactaaaggaaaagtttaaaaaaaaacggt 805 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1456 ttgatcactgtcattactacaaacaattctcactaaaggaaaagttgaaaaaaaaacggt 1515 Query: 806 tacgcgcagcgggaaagatgtacttcctggtgagacattactactttaaggactccgtct 865 |||||||||||| |||||||||| | |||||||||| ||||||| ||||||||||||| Sbjct: 1516 tacgcgcagcggagaagatgtactcctgggtgagacataactacttaaaggactccgtct 1575 Query: 866 catattaaagtgattaagtgcatataactgattatcagnaaatat 910 |||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 1576 catattaaagtgattaagtgcataatactgattatcagtaaatat 1620 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7172 Number of Sequences: 1807 Number of extensions: 7172 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)