BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZA12FM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig829                                                         1550   0.0  

>3x_Contig829 
          Length = 2277

 Score = 1550 bits (782), Expect = 0.0
 Identities = 814/825 (98%)
 Strand = Plus / Plus

                                                                        
Query: 86   ctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttataaaaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  ctattcatggacctatcaccttagaaattgcctctgatgtggaaagcagttttataaaaa 855

                                                                        
Query: 146  aggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcgacagt 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  aggcagactgtgacactttcacagtcagctattttccaacaaataatggctggcgacagt 915

                                                                        
Query: 206  atacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcaaaactg 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  atacccaaaacaggactcatgccgaagaaagagtaatgaacaatagtattttcaaaactg 975

                                                                        
Query: 266  acgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctgaaat 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  acgaaaccaggattgaccatacagatcacagtgtttcagctgattatccacatctgaaat 1035

                                                                        
Query: 326  cttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcgatata 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 cttcattaaaagacgaatctgtcgaatatttttcaaatgatcaatctttcgttcgatata 1095

                                                                        
Query: 386  ttgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaaactc 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 ttgatgccaggttcgattcagaaagtataggatctacaaattcgtcagagaaacaaactc 1155

                                                                        
Query: 446  tctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcagtttg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 tctgttcttcaatcaacacaagcaaaatcatttatccaagtatggctggagctcagtttg 1215

                                                                        
Query: 506  atggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggttttttgg 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 atggtgatccaatgcctcttttagatcatccgaatttgacacacttcagtggttttttgg 1275

                                                                        
Query: 566  ctgaaaatgattctgttgaaccttctcttgaaaatgacaaggacatgcagacagaaaact 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 ctgaaaatgattctgttgaaccttctcttgaaaatgacaaggacatgcagacagaaaact 1335

                                                                        
Query: 626  tgtctaatacgatcaattcatctgacactacgaagaaattcttagcttgggaatataagg 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 tgtctaatacgatcaattcatctgacactacgaagaaattcttagcttgggaatataagg 1395

                                                                        
Query: 686  atgataaatttgttaaagtaccgtgtacccctccaaatgaagataacgttgaatgggaca 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 atgataaatttgttaaagtaccgtgtacccctccaaatgaagataacgttgaatgggaca 1455

                                                                        
Query: 746  ttgatcactgtcattactacaaacaattctcactaaaggaaaagtttaaaaaaaaacggt 805
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1456 ttgatcactgtcattactacaaacaattctcactaaaggaaaagttgaaaaaaaaacggt 1515

                                                                        
Query: 806  tacgcgcagcgggaaagatgtacttcctggtgagacattactactttaaggactccgtct 865
            ||||||||||||  |||||||||| |  |||||||||| ||||||| |||||||||||||
Sbjct: 1516 tacgcgcagcggagaagatgtactcctgggtgagacataactacttaaaggactccgtct 1575

                                                         
Query: 866  catattaaagtgattaagtgcatataactgattatcagnaaatat 910
            ||||||||||||||||||||||||  |||||||||||| ||||||
Sbjct: 1576 catattaaagtgattaagtgcataatactgattatcagtaaatat 1620


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7172
Number of Sequences: 1807
Number of extensions: 7172
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)