BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZB01FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1173                                                        1415   0.0  

>3x_Contig1173 
          Length = 7454

 Score = 1415 bits (714), Expect = 0.0
 Identities = 752/761 (98%), Gaps = 3/761 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   gaatgccagtaaaactaccacaattacaacatactatcttgcaatcgtgcagaatcaatg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3937 gaatgccagtaaaactaccacaattacaacatactatcttgcaatcgtgcagaatcaatg 3878

                                                                        
Query: 147  tcacaattttttgaatataaagacactataaaagagggtgatttggtgcttgcatggttg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3877 tcacaattttttgaatataaagacactataaaagagggtgatttggtgcttgcatggttg 3818

                                                                        
Query: 207  tccagggacaatttgaagccaatcaccgtgaaagctggcgaggttttcaacactcgttat 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 tccagggacaatttgaagccaatcaccgtgaaagctggcgaggttttcaacactcgttat 3758

                                                                        
Query: 267  ggtgctttctcacattcagatatgattggaaaaccatttggttctcaaattgctattaga 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 ggtgctttctcacattcagatatgattggaaaaccatttggttctcaaattgctattaga 3698

                                                                        
Query: 327  acgaagggaagtaatagatttggtttcattcacgttctgcagccgaccccggaactatgg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 acgaagggaagtaatagatttggtttcattcacgttctgcagccgaccccggaactatgg 3638

                                                                        
Query: 387  tctatctctttacctcacagaacccagattgtttatacaccagattcctcctatatcatg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3637 tctatctctttacctcacagaacccagattgtttatacaccagattcctcctatatcatg 3578

                                                                        
Query: 447  cagcggatggagtgcaatcctagatctagggtcattgaagcaggtacggggtcaggttcc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 cagcggatggagtgcaatcctagatctagggtcattgaagcaggtacggggtcaggttcc 3518

                                                                        
Query: 507  ttttctcatgcgtttgccagatctgcaggtcatttattctcatatgagttccacgaagta 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3517 ttttctcatgcgtttgccagatctgcaggtcatttattctcatatgagttccacgaagta 3458

                                                                        
Query: 567  agatacgaacaagcgaagcaggaatttaaagaacatggactattggaagctggaaacact 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3457 agatacgaacaagcgaagcaggaatttaaagaacatggactattggaagctggaaacact 3398

                                                                        
Query: 627  accataacgcatagagatgtttgtaaagatggatgtgaaa-taaaaacggtgacaccaca 685
            |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 3397 accataacgcatagagatgtttgtaaagatggatttgaaattaaaaacggtgacaccaca 3338

                                                                        
Query: 686  tcgcatgaattcagaggtccagatgatacgaaggtggagttgaatgctgactgcatattt 745
            ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 3337 tcgcatgaattcagaggtccagaggaaacgaaggtggagttgaatgctgactgcatattt 3278

                                                                        
Query: 746  ttagatcttccagcaccatgggatgccatacccaatttgacttccgtttatctcaaagga 805
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3277 ttagatcttccagcaccatgggatgccatacccaatttgacttccg-ttatctcaaagga 3219

                                                     
Query: 806  aaagaaggtaaanttttgctgcttcctccccatgcatcgaa 846
            ||||||||||||  | |||||||| ||||||||||||||||
Sbjct: 3218 aaagaaggtaaatctctgctgctt-ctccccatgcatcgaa 3179


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5323
Number of Sequences: 1807
Number of extensions: 5323
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)