BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZB01RM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig787 1524 0.0 >3x_Contig787 Length = 1880 Score = 1524 bits (769), Expect = 0.0 Identities = 830/845 (98%), Gaps = 4/845 (0%) Strand = Plus / Plus Query: 56 gaaaaaaaatcaaagccaacattataacagctacgaacgactcggtaaagtccagtagta 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gaaaaaaaatcaaagccaacattataacagctacgaacgactcggtaaagtccagtagta 895 Query: 116 gttttgaggtcaggcctcaaaaattaaccttaatttagttcgagtttattacaattctaa 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 gttttgaggtcaggcctcaaaaattaaccttaatttagttcgagtttattacaattctaa 955 Query: 176 tataactactagtatgcaattctttcattattatttttagctattgttaaacgttttagg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 tataactactagtatgcaattctttcattattatttttagctattgttaaacgttttagg 1015 Query: 236 tctatatcccagaagaatactgggctgctgtaatccgtaatagattgtatctatttatta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 tctatatcccagaagaatactgggctgctgtaatccgtaatagattgtatctatttatta 1075 Query: 296 ttgtttctattactattttttttggttttcctgtacttacttactctttggtgcaagttt 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 ttgtttctattactattttttttggttttcctgtacttacttactctttggtgcaagttt 1135 Query: 356 gaatgtcaagatatcgttaacaccttcgtccaccttatcatcttcactgaccctgatacc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 gaatgtcaagatatcgttaacaccttcgtccaccttatcatcttcactgaccctgatacc 1195 Query: 416 accaacagtttcaatagcagctacagtgacgtcacccataatgtaagtagcaactttccc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1196 accaacagtttcaatagcagctacagtgacgtcacccataatgtaagtagcaactttccc 1255 Query: 476 taccgtagtccccttcttgaccagaaaacaatcgcggaacacattttcaccgttcccacc 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 taccgtagtccccttcttgaccagaaaacaatcgcggaacacattttcaccgttcccacc 1315 Query: 536 agcgaaggtatggatgttgcgtaccgtgtacaccgggatcaaatttaaagtacttgcagc 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 agcgaaggtatggatgttgcgtaccgtgtacaccgggatcaaatttaaagtacttgcagc 1375 Query: 596 tgcctgtaatacttgaacgacacctgtagaaccgaatctgtatagtacaaggtctcgtat 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 tgcctgtaatacttgaacgacacctgtagaaccgaatctgtatagtacaaggtctcgtat 1435 Query: 656 aacttcaattctctgtatcagtttctcatctaacggttttaacgtatcgtcatctttcaa 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1436 aacttcaattctctgtatcagtttctcatctaacggttttaacgtatcgtcatcttcaaa 1495 Query: 716 cgtatcaac-aattctgtgccttcttcgt-acgtatgaacccttgtttcttcattttacg 773 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1496 cgtatcaacaaattctgtgccttcttcgtaacgtatgaacccttgtttcttcaatttacg 1555 Query: 774 gaggaaaacttcggtgatggcacttgttaggacacattttacgtcagggtatttcaacat 833 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1556 gaggaaaacttcggtgatggcacttgttaggacacatttaacgtcagggtatttcaacat 1615 Query: 834 aatcttacttacgtttttatccgaatttggaatgat-catcttgtttcaagccaaaacag 892 ||||||||| ||||||||||||| || ||| ||||| ||||||||| ||||||| |||| Sbjct: 1616 aatcttactaacgtttttatccgcatctgg-atgatccatcttgttcaaagccaacacag 1674 Query: 893 ggggg 897 |||| Sbjct: 1675 tgggg 1679 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7240 Number of Sequences: 1807 Number of extensions: 7240 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)