BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZB09RM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig600                                                         1419   0.0  

>3x_Contig600 
          Length = 2338

 Score = 1419 bits (716), Expect = 0.0
 Identities = 793/812 (97%), Gaps = 5/812 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   acttctagctcttcttaaccttctttt-aacacttcgttttttgtcttggtcttgggctg 106
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1032 acttctagctcttcttaaccttcttttcaacacttcgttttttgtcttggtcttgggctg 1091

                                                                        
Query: 107  tgaattatccacagctttacgtgtacgtaaccgaagttcatcctgtagctgtttctgttg 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 tgaattatccacagctttacgtgtacgtaaccgaagttcatcctgtagctgtttctgttg 1151

                                                                        
Query: 167  tccctggtagtacaaagctgcgaaagaatccgtattcgccagctttatatttatctttct 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 tccctggtagtacaaagctgcgaaagaatccgtattcgccagctttatatttatctttct 1211

                                                                        
Query: 227  cccattaatcttgagcttgccttgaaattctataaggaacgtattacaactgtctgagtc 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 cccattaatcttgagcttgccttgaaattctataaggaacgtattacaactgtctgagtc 1271

                                                                        
Query: 287  cttaaaagtgacgaaacaagacctcctcaagggtcttgagccataccttgatacctctat 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 cttaaaagtgacgaaacaagacctcctcaagggtcttgagccataccttgatacctctat 1331

                                                                        
Query: 347  gatctgatacttttcatcgagtactggtgtaaccgcatcagcctcactagtttctttctt 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 gatctgatacttttcatcgagtactggtgtaaccgcatcagcctcactagtttctttctt 1391

                                                                        
Query: 407  cgagttcagatcgaatcttgtactaacatcatttgaaatagaacgatgatctgaattaac 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 cgagttcagatcgaatcttgtactaacatcatttgaaatagaacgatgatctgaattaac 1451

                                                                        
Query: 467  acttgatagtagtaaggctctgaatttggacaatgagtcgggcctcgacggtagattcga 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 acttgatagtagtaaggctctgaatttggacaatgagtcgggcctcgacggtagattcga 1511

                                                                        
Query: 527  cagatataaggtactgaccattgcttgccgatagatactagctttgtatggcatgtgtaa 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 cagatataaggtactgaccattgcttgccgatagatactagctttgtatggcatgtgtaa 1571

                                                                        
Query: 587  taacctaatagagaaggatatcacaacctattaacaaatagtccatacgtattagtatta 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 taacctaatagagaaggatatcacaacctattaacaaatagtccatacgtattagtatta 1631

                                                                        
Query: 647  gtaaatttgttgacattgaaagttgttgttacgttaaattaagattatttgaat-actaa 705
            ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 1632 gtaaatttgttgacaatgaaagttgttgttacgttaagttaagattatatgaataactaa 1691

                                                                        
Query: 706  atactaaatagaaatgtaattccagtgagaacaaaacaaaaaaaaccg-acagggaaact 764
            ||||||||||||||||||| | ||||||||||||||||||||||| || |||| ||||||
Sbjct: 1692 atactaaatagaaatgtaaatacagtgagaacaaaacaaaaaaaaacgaacagagaaact 1751

                                                                        
Query: 765  taattcccattaattgagagttctattttatagaaaatgcaaactccaactaaatgggaa 824
             ||| | ||||||||||||||||||| |  ||||||||||||||||||||||||||||||
Sbjct: 1752 aaatccacattaattgagagttctatctattagaaaatgcaaactccaactaaatgggaa 1811

                                            
Query: 825  aac-gataaccttctttaatttttttttaatg 855
            ||| ||||||| ||||| ||||||||||||||
Sbjct: 1812 aacagataacc-tcttttatttttttttaatg 1842


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9125
Number of Sequences: 1807
Number of extensions: 9125
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)