BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZC07FM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1699                                                        1499   0.0  

>3x_Contig1699 
          Length = 18038

 Score = 1499 bits (756), Expect = 0.0
 Identities = 811/827 (98%), Gaps = 2/827 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ttgttataaatgcttgcttctatcagttgatgtgatatttctaggtattgaaacttaaag 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 ttgttataaatgcttgcttctatcagttgatgtgatatttctaggtattgaaacttaaag 1912

                                                                        
Query: 147  aggtacattgtctatatctattttaatttaatgttttacgtactgaactaaaaacaacat 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 aggtacattgtctatatctattttaatttaatgttttacgtactgaactaaaaacaacat 1852

                                                                        
Query: 207  tcgaaaggtagtcattgtttcatggccctcaatttgtaaaataatattggtctacgaatt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 tcgaaaggtagtcattgtttcatggccctcaatttgtaaaataatattggtctacgaatt 1792

                                                                        
Query: 267  gtcttctaacatgttatccaaatacactgaaggagtaatagaagatgatttattgtgccc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 gtcttctaacatgttatccaaatacactgaaggagtaatagaagatgatttattgtgccc 1732

                                                                        
Query: 327  tttacttctgccctgtcttttttggttatcgagagtagtggaagctgttaaatcaattgt 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 tttacttctgccctgtcttttttggttatcgagagtagtggaagctgttaaatcaattgt 1672

                                                                        
Query: 387  tgaatccaccaatttgctcaaactggatttactcttttcatgcttatatgttcttctttc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 tgaatccaccaatttgctcaaactggatttactcttttcatgcttatatgttcttctttc 1612

                                                                        
Query: 447  cggagatactgtgcgtgttggttccatcatctctggtgtatcgatagagactgctgattg 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 cggagatactgtgcgtgttggttccatcatctctggtgtatcgatagagactgctgattg 1552

                                                                        
Query: 507  gttcaagttattgaacagtgtcgatctccgttgttggttcataacttccatcgttggtga 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 gttcaagttattgaacagtgtcgatctccgttgttggttcataacttccatcgttggtga 1492

                                                                        
Query: 567  gatgtataaagatttcctcacacctgtattggctgcatcaatagcatctactctttccag 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 gatgtataaagatttcctcacacctgtattggctgcatcaatagcatctactctttccag 1432

                                                                        
Query: 627  tggattcatagatcccagattggtattaccgatagatgatggtgttcctcctccgaaacc 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 tggattcatagatcccagattggtattaccgatagatgatggtgttcctcctccgaaacc 1372

                                                                        
Query: 687  atcgtcggtggatccacctaacagtcgaatcatgctatgagatgccctcttatacggagt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 atcgtcggtggatccacctaacagtcgaatcatgctatgagatgccctcttatacggagt 1312

                                                                        
Query: 747  aaacgaattgtttccgccatttttcgttagcactggagtggctttgtatgtgctaatatc 806
            |||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||
Sbjct: 1311 aaacgaattgtttccgccatttttcgtaggcactggagtgtctttgtatgtgctaatatc 1252

                                                                        
Query: 807  ctcatcagctttatagtagccaccaccctgactgaaaattttttcggtttataaaagnat 866
            |||||||||||||||||||||||||||   |||||||  | | || || ||| |||| ||
Sbjct: 1251 ctcatcagctttatagtagccaccacctgaactgaaatctatatc-gtctatgaaaggat 1193

                                                           
Query: 867  tttggaactgctttttccatattgttaaatttctttaactgtttcgc 913
            ||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1192 tttggaactgc-ttttccatattgttaaatttctttagctgtttcgc 1147


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6373
Number of Sequences: 1807
Number of extensions: 6373
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)