BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZC08RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1787 1610 0.0 >3x_Contig1787 Length = 34189 Score = 1610 bits (812), Expect = 0.0 Identities = 876/892 (98%), Gaps = 4/892 (0%) Strand = Plus / Plus Query: 44 cttaatgctcgtgtagctctgcgatactcacttctgatgttcccattatgttttggtctt 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21484 cttaatgctcgtgtagctctgcgatactcacttctgatgttcccattatgttttggtctt 21543 Query: 104 tcatacttcaatgtcaccgactggtattatcaattggattcagcatttgttaatgcttgg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21544 tcatacttcaatgtcaccgactggtattatcaattggattcagcatttgttaatgcttgg 21603 Query: 164 atgtcactatgggcattcaagttttatttccagcaaaagcgtaattactccatttttata 223 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 21604 atgtcactatgggcattcaagttttatttccagcaaaagcgtaattactccaaggagata 21663 Query: 224 tacaataacaagacagaattcaacaaagggttggcaatggccaacgtttatgcgaggaga 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21664 tacaataacaagacagaattcaacaaagggttggcaatggccaacgtttatgcgaggaga 21723 Query: 284 acattctgggtcagtgtactacatttgccggcagtattgattttagcaattttgcataaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21724 acattctgggtcagtgtactacatttgccggcagtattgattttagcaattttgcataaa 21783 Query: 344 aaggaccgttgggactggctctttgaagataagaaacaactctcagcataatttcacaca 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21784 aaggaccgttgggactggctctttgaagataagaaacaactctcagcataatttcacaca 21843 Query: 404 ttcattcaacatcaggaaaatcttacttgtgaatagtaatttattattatgtatttaatt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21844 ttcattcaacatcaggaaaatcttacttgtgaatagtaatttattattatgtatttaatt 21903 Query: 464 cagaacgaaaatcatcaattattttgtaaacataaactgtaaatattcagaaatccgttc 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21904 cagaacgaaaatcatcaattattttgtaaacataaactgtaaatattcagaaatccgttc 21963 Query: 524 aagaagtttacacaagctcagaagattagttatcagatttctataattattaaggtacac 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21964 aagaagtttacacaagctcagaagattagttatcagatttctataattattaaggtacac 22023 Query: 584 atggtacggctatttgatcatgatatatgcaaaaatactctatttataataatttaccga 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22024 atggtacggctatttgatcatgatatatgcaaaaatactctatttataataatttaccga 22083 Query: 644 agttcaacggtcgaagagtccatcatcaacataatcctcatcgtcataatattcatcagt 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22084 agttcaacggtcgaagagtccatcatcaacataatcctcatcgtcataatattcatcagt 22143 Query: 704 gtaatcagactcggatccagatgaatctgaatccagtaaagaagatgcgtaatcttcgtc 763 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22144 gtaatcagactcggatccagatgaatctgaatccagtaaagaggatgcgtaatcttcgtc 22203 Query: 764 atctatgtaaatacttgtcaaagtttcacccttgagagtggatttttcattgacaatata 823 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22204 atctatgtaaatacttgtcaaagtttcacccttgagagtggatttttcattgacaatata 22263 Query: 824 agaagccttcaacataacaattttgtaagctttgatttcctggccgatttttggcatttc 883 || |||| |||||||||||| ||||||||||||||||| || |||||||||| ||||||| Sbjct: 22264 ag-agccctcaacataacaa-tttgtaagctttgattt-cttgccgattttt-gcatttc 22319 Query: 884 taccgatgatgacattttctaactggggtttatcatcaaattcaacattatc 935 ||||||||||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 22320 taccgatgatgacattttctagctgggtttcatcatcaatttcaacattatc 22371 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8468 Number of Sequences: 1807 Number of extensions: 8468 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)