BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZC08RM1.SCF screened BAC_end
         (936 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1787                                                        1610   0.0  

>3x_Contig1787 
          Length = 34189

 Score = 1610 bits (812), Expect = 0.0
 Identities = 876/892 (98%), Gaps = 4/892 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    cttaatgctcgtgtagctctgcgatactcacttctgatgttcccattatgttttggtctt 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21484 cttaatgctcgtgtagctctgcgatactcacttctgatgttcccattatgttttggtctt 21543

                                                                         
Query: 104   tcatacttcaatgtcaccgactggtattatcaattggattcagcatttgttaatgcttgg 163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21544 tcatacttcaatgtcaccgactggtattatcaattggattcagcatttgttaatgcttgg 21603

                                                                         
Query: 164   atgtcactatgggcattcaagttttatttccagcaaaagcgtaattactccatttttata 223
             ||||||||||||||||||||||||||||||||||||||||||||||||||||     |||
Sbjct: 21604 atgtcactatgggcattcaagttttatttccagcaaaagcgtaattactccaaggagata 21663

                                                                         
Query: 224   tacaataacaagacagaattcaacaaagggttggcaatggccaacgtttatgcgaggaga 283
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21664 tacaataacaagacagaattcaacaaagggttggcaatggccaacgtttatgcgaggaga 21723

                                                                         
Query: 284   acattctgggtcagtgtactacatttgccggcagtattgattttagcaattttgcataaa 343
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21724 acattctgggtcagtgtactacatttgccggcagtattgattttagcaattttgcataaa 21783

                                                                         
Query: 344   aaggaccgttgggactggctctttgaagataagaaacaactctcagcataatttcacaca 403
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21784 aaggaccgttgggactggctctttgaagataagaaacaactctcagcataatttcacaca 21843

                                                                         
Query: 404   ttcattcaacatcaggaaaatcttacttgtgaatagtaatttattattatgtatttaatt 463
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21844 ttcattcaacatcaggaaaatcttacttgtgaatagtaatttattattatgtatttaatt 21903

                                                                         
Query: 464   cagaacgaaaatcatcaattattttgtaaacataaactgtaaatattcagaaatccgttc 523
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21904 cagaacgaaaatcatcaattattttgtaaacataaactgtaaatattcagaaatccgttc 21963

                                                                         
Query: 524   aagaagtttacacaagctcagaagattagttatcagatttctataattattaaggtacac 583
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21964 aagaagtttacacaagctcagaagattagttatcagatttctataattattaaggtacac 22023

                                                                         
Query: 584   atggtacggctatttgatcatgatatatgcaaaaatactctatttataataatttaccga 643
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22024 atggtacggctatttgatcatgatatatgcaaaaatactctatttataataatttaccga 22083

                                                                         
Query: 644   agttcaacggtcgaagagtccatcatcaacataatcctcatcgtcataatattcatcagt 703
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22084 agttcaacggtcgaagagtccatcatcaacataatcctcatcgtcataatattcatcagt 22143

                                                                         
Query: 704   gtaatcagactcggatccagatgaatctgaatccagtaaagaagatgcgtaatcttcgtc 763
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22144 gtaatcagactcggatccagatgaatctgaatccagtaaagaggatgcgtaatcttcgtc 22203

                                                                         
Query: 764   atctatgtaaatacttgtcaaagtttcacccttgagagtggatttttcattgacaatata 823
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22204 atctatgtaaatacttgtcaaagtttcacccttgagagtggatttttcattgacaatata 22263

                                                                         
Query: 824   agaagccttcaacataacaattttgtaagctttgatttcctggccgatttttggcatttc 883
             || |||| |||||||||||| ||||||||||||||||| || |||||||||| |||||||
Sbjct: 22264 ag-agccctcaacataacaa-tttgtaagctttgattt-cttgccgattttt-gcatttc 22319

                                                                 
Query: 884   taccgatgatgacattttctaactggggtttatcatcaaattcaacattatc 935
             ||||||||||||||||||||| ||||| || |||||||| ||||||||||||
Sbjct: 22320 taccgatgatgacattttctagctgggtttcatcatcaatttcaacattatc 22371


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8468
Number of Sequences: 1807
Number of extensions: 8468
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)