BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZC12RM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1459 0.0 >3x_Contig1486 Length = 12131 Score = 1459 bits (736), Expect = 0.0 Identities = 838/861 (97%), Gaps = 9/861 (1%) Strand = Plus / Minus Query: 47 gcttgtatcttcttctcctgtttttaaacactttgagtacaaatcaatgcactcttgata 106 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2964 gcttgtatcttcttctcctgttcagaaacactttgagtacaaatcaatgcactcttgata 2905 Query: 107 tctgggatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatct 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2904 tctgggatttgatacaacatcaatattgatcaatcacgtcgttcttgctcaacggtatct 2845 Query: 167 gctgtggcagtttttatgagttccttttatagtgcataagtaagatcaaatgtttttttt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2844 gctgtggcagtttttatgagttccttttatagtgcataagtaagatcaaatgttttggtt 2785 Query: 227 gattcaatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2784 gattcaatatataaaatttttttaatatgttaacaataatcctattaaactaatatcaaa 2725 Query: 287 cgaattcaacatggcactagtgactgacattaataaaggataactgcgatctgattatag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2724 cgaattcaacatggcactagtgactgacattaataaaggataactgcgatctgattatag 2665 Query: 347 ttacactaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccgg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2664 ttacactaacatcgaccttcaatacaccgaaagattctagaaaaagtctaaaatgtccgg 2605 Query: 407 ctctaaagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2604 ctctaaagtaggagctcctatggtacctccaatcaattgcatatacaactaccttcatca 2545 Query: 467 tcagacaacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2544 tcagacaacagtaacgttttggttatacgaacaagtacagacacgtataagaggcaagat 2485 Query: 527 cagaggctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtaga 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2484 cagaggctttgatgagttcatgaatgtggtaatagatgacgctttcgaaatagctgtaga 2425 Query: 587 tccgaaaagtggtaaagagagcgatgataaagcagtgtttcttgngagaattatgttgaa 646 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2424 tccgaaaagtggtaaagagagcgatgataaagcagtgtttcttgggagaattatgttgaa 2365 Query: 647 aggtgataatataacacttgttgtggcanattgataatgcctactcagaaaatgataata 706 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2364 aggtgataatataacacttgttgtggcaaattgataatgcctactcagaaaatgataata 2305 Query: 707 ggatgaaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgt-attata 765 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2304 ggatgaaagaaagatgcttagagtgtagaagcattgatcggactctgtcgtgtaattata 2245 Query: 766 taagcctgtatattat-acgg-aaaatgaaa-gcacttgaatttcgat-acggcgac-ag 820 |||||||||||||||| |||| ||||||||| ||||| ||||||||| |||||||| || Sbjct: 2244 taagcctgtatattataacggaaaaatgaaaggcactgaaatttcgataacggcgacaag 2185 Query: 821 cactatcaagcttaat-aaga-atattgntcgtaat-ttatggatctatttacaatgtgt 877 |||||||||| |||| |||| |||||| ||||||| ||||||||||||||||||||||| Sbjct: 2184 cactatcaaggctaataaagatatattgttcgtaatcttatggatctatttacaatgtgt 2125 Query: 878 tgctcaaattggggaggatac 898 |||||| ||||||||| |||| Sbjct: 2124 tgctcagattggggagaatac 2104 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7037 Number of Sequences: 1807 Number of extensions: 7037 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)