BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZD03RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1507 1469 0.0 >3x_Contig1507 Length = 11359 Score = 1469 bits (741), Expect = 0.0 Identities = 823/844 (97%), Gaps = 5/844 (0%) Strand = Plus / Minus Query: 44 gcttgcgtaaatatcttttgaatatgctcgttactgcgtgaacatcagtattttgctttc 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10023 gcttgcgtaaatatcttttgaatatgctcgttactgcgtgaacatcagtattttgctttc 9964 Query: 104 caaaatcgactttttcttcttctgcaaacattttctcgtattgctctatgataacctgac 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9963 caaaatcgactttttcttcttctgcaaacattttctcgtattgctctatgataacctgac 9904 Query: 164 tacctgattttctgtaaataccttcggccatcatatattcagggtctgattctttttttt 223 ||||||||||||||||||||| |||||||||||||||||||||||||||||| | | | Sbjct: 9903 tacctgattttctgtaaatac-ttcggccatcatatattcagggtctgattcgatatagt 9845 Query: 224 tgatgcatgttgtaatgattaatggaacatcccgtctttcatatgcacatcttgcaacca 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9844 tgatgcatgttgtaatgattaatggaacatcccgtctttcatatgcacatcttgcaacca 9785 Query: 284 gggatgatccatagagagtttgtccatcagaactggaagatgataaactgttccttggaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9784 gggatgatccatagagagtttgtccatcagaactggaagatgataaactgttccttggaa 9725 Query: 344 cagagtcattcgacgcggaatagggaattgggaaaagtttcaggtcatcaaattcatttg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9724 cagagtcattcgacgcggaatagggaattgggaaaagtttcaggtcatcaaattcatttg 9665 Query: 404 gattctgtagcattggagcactaatttctatggatttggaagaatttggattgacctgtc 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9664 gattctgtagcattggagcactaatttctatggatttggaagaatttggattgacctgtc 9605 Query: 464 ttacattagtattcccacttccgaaaagtttccaaaatcgaggttgtgcaatactgctat 523 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9604 ttacattagtattcccacttccgaaaagtttccaaaatcgaggttttgcaatactgctat 9545 Query: 524 tggatgtagaagggagttggtttctagtagggcttagagcattattgcttccgttgaaat 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9544 tggatgtagaagggagttggtttctagtagggcttagagcattattgcttccgttgaaat 9485 Query: 584 ccacctcgtatgcgtcgtcagttaatgattcttgtgatgtcgtcgttaatttgagatccc 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9484 ccacctcgtatgcgtcgtcagttaatgattcttgtgatgtcgtcgttaatttgagatccc 9425 Query: 644 gtttttcaattcgaagggcttcngtttctgacgtcaaagtctcttgtgtaatctttagtt 703 |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 9424 gtttttcaattcgaagggcttcggtttctgacgtcaaagtctcttttgtaatctttagtt 9365 Query: 704 tttcaatgtcagcagttaattgagccttcgtcagttgtaattccttgacctccatattaa 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9364 tttcaatgtcagcagttaattgagccttcgtcagttgtaattccttgacctccatattaa 9305 Query: 764 gtttctcttaactgcaaactgatagatttcacgtcctttttcgaag-aattttttgccac 822 ||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| Sbjct: 9304 gtttc-cttaactgcaaactgatagatttcacgtcc-ttttcgaagaaatcttttgccac 9247 Query: 823 aagagtgaattctcgatcatcgtcggatttttcttccttcc-tatagggctttgtttttt 881 | |||||||| |||||||||||||||||||||| |||| || ||||| |||||| || || Sbjct: 9246 aggagtgaatactcgatcatcgtcggatttttcgtcctcccgtatagtgctttggttatt 9187 Query: 882 agga 885 |||| Sbjct: 9186 agga 9183 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7995 Number of Sequences: 1807 Number of extensions: 7995 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)