BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZD06FM1.SCF screened BAC_end (841 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1606 858 0.0 >3x_Contig1606 Length = 11468 Score = 858 bits (433), Expect = 0.0 Identities = 513/533 (96%), Gaps = 5/533 (0%) Strand = Plus / Plus Query: 87 tcgtgaacaagctgtgtaccagtacttaaattccaaataaatagatgagaattttggttg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 tcgtgaacaagctgtgtaccagtacttaaattccaaataaatagatgagaattttggttg 885 Query: 147 gaattaccgactgcagcgattgtgtttgaatgaatttggtctattgtaagtgcgtcccag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 gaattaccgactgcagcgattgtgtttgaatgaatttggtctattgtaagtgcgtcccag 945 Query: 207 ttgttaacgtgcacacttggcttgaacgaggtcaccaaatcatgatctgataatttaaat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 ttgttaacgtgcacacttggcttgaacgaggtcaccaaatcatgatctgataatttaaat 1005 Query: 267 aacttaatgacactatcttttgctggaattgcatattggtctcctttattggtccatgca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 aacttaatgacactatcttttgctggaattgcatattggtctcctttattggtccatgca 1065 Query: 327 actctagtgcatgttctgttatcttcgcatagcataggatcaagtccatctatagcgact 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 actctagtgcatgttctgttatcttcgcatagcataggatcaagtccatctatagcgact 1125 Query: 387 gaatcggcgttttcagtattattctcagtgtccgctggtagatcatcattgaagaatatc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 gaatcggcgttttcagtattattctcagtgtccgctggtagatcatcattgaagaatatc 1185 Query: 447 ttaggtagctgatcatgcaatgtgtggattctatttggtgtagtagaacttaaagagttg 506 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct: 1186 ttaggtagctgatcatgcaatgtgtggattctattgggtgtagtagaacttaaagagtag 1245 Query: 507 aataccacgttacccgttactgatggatactgctaaaagggtatttttggtggttggatg 566 ||||| |||||| |||||||||| |||||||||| || | || ||||| | |||| ||| Sbjct: 1246 aatacaacgtta-ccgttactgagtgatactgctagaatgtta-ttttgtttgttgtatg 1303 Query: 567 aaaaaccaacccaattgtttcgcccaaagttaatttaaccgtttgaatttccc 619 | |||| || ||| ||| |||| ||||||||||||||| |||||||||||||| Sbjct: 1304 ataaactaa-ccagttg-ttcgtccaaagttaatttaa-cgtttgaatttccc 1353 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,468 Number of Sequences: 1807 Number of extensions: 18468 Number of successful extensions: 1781 Number of sequences better than 1.0e-20: 1 length of query: 841 length of database: 10,358,551 effective HSP length: 16 effective length of query: 825 effective length of database: 10,329,639 effective search space: 8521952175 effective search space used: 8521952175 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)